| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1187 |
|---|
| Symbol | leuS |
|---|
| ID | 8132116 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012917 |
|---|
| Strand | - |
|---|
| Start bp | 1383146 |
|---|
| End bp | 1385728 |
|---|
| Gene Length | 2583 bp |
|---|
| Protein Length | 860 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 644864469 |
|---|
| Product | leucyl-tRNA synthetase |
|---|
| Protein accession | YP_003016771 |
|---|
| Protein GI | 253687581 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0495] Leucyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00396] leucyl-tRNA synthetase, eubacterial and mitochondrial family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.0879565 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGAGC AATACCGCCC AGAAGAGATA GAAGCGGACG TCCAGCTTCA CTGGCAAGAG
AAGCAGACAT TTAAAGTCAC CGAACAGCCC GGCAAGGAAA AATACTATTG CCTTTCCATG
CTGCCTTACC CTTCTGGCCG ACTACATATG GGCCACGTCC GTAACTACAC CATTGGCGAC
GTGATCTCCC GCTATCAGCG CATGCTGGGT AAAAACGTTC TACAACCGAT TGGTTGGGAT
GCTTTTGGTC TGCCGGCCGA AGGCGCTGCA GTCAAGAACA ACACCGCGCC AGCGCCCTGG
ACCTACGCCA ACATCGACTA CATGAAAAAC CAGCTCAAAC TGCTGGGCTT TGGCTATGAC
TGGGATCGCG AAGTTGCGAC CTGTAAACCA GACTACTACC GTTGGGAACA GTGGTTCTTC
ACCAAGCTGT ACGAGAAAGG TCTGGTTTAT AAAAAAACCT CCGCCGTTAA CTGGTGCCCG
AACGATCAAA CCGTACTGGC GAACGAACAG GTTATCGATG GCTGCTGCTG GCGTTGTGAC
ACCAAAGTTG AACGCAAAGA GATTCCGCAG TGGTTTATCA AAATCACCGC TTATGCAGAC
CAATTGCTAA ACGATCTGGA TACGCTGGAA AGCTGGCCTG AGCAGGTCAA AACCATGCAG
CGTAACTGGA TTGGCCGCTC CGAAGGTGTG GAAATCACGT TTGACGTGGC GGACAGCGCC
GAGAAACTGA CCGTTTACAC CACGCGCCCG GATACGTTCA TGGGCGTAAC CTACGTGGCC
GTTGCCGCAG GTCACCCTCT CGCCGCACAA GCTGCCGCAG CGAACCCGGC GCTGGCCGAT
TTCATTGCAG AATGCCGTAA TACCAAAGTT GCCGAAGCCG ATATGGCGAC AATGGAGAAA
AAAGGCATGG CCACCGGCCT GTATGCGATT CACCCGTTGA ACGGCGAGAA AGTCGCTATC
TGGGTCGCCA ACTTCGTCCT GATGGAATAC GGTACAGGTG CTGTGATGGC CGTTCCGGGT
CACGACCAGC GTGACTGGGA ATTCGCCACC AAATATGACT TGTCCATTAA GCCAGTCATC
CTGAACGCCG ATGGCAGCGA GCCCGACCTG TCTGCTGAAG CCATGACGGA AAAAGGCAAC
CTGTTCAATT CCGGTGAATT TGACGGCCTG GATTTCGACG CAGCCTTTAA CGCCATTGCC
GATAAGCTGG TAGAGAAAGG CATTGGCGAA CGTAAAGTCA ACTATCGCCT ACGCGACTGG
GGTGTATCTC GTCAGCGCTA CTGGGGCGCG CCAATTCCAA TGGTGACACT GGAAGACGGC
ACCGTTATCC CGACGCCAGA AGATCAGCTG CCAGTGATCC TGCCGGAAGA TGTCGTGATG
GACGGCATCA CCAGCCCTCT GAAATCTAAT CCAGAATGGG CGAAGACCAC CGTTAACGGT
CAGCCTGCGC TGCGTGAAAC CGACACGTTC GACACCTTTA TGGAATCCTC CTGGTACTAC
GCGCGCTATA CTTGCCCGCA GTACGATCAG GGAATGTTGG ATCCGGCTGC CGCCAACTAC
TGGCTGCCCG TTGACCAATA CGTTGGCGGT ATCGAACACG CCATCATGCA CCTGATGTAT
TTCCGCTTCT TCCACAAACT GATGCGCGAC GCGGGTCTGG TTACTTCTGA CGAACCTGCC
AAACGCCTGC TGTGTCAGGG CATGGTGCTG GCCGATGCCT TCTACTATCT GGGCAACAAC
GGCGAGCGCG TATGGGTTTC TCCTATCGAC GTTGACGTTG AGCGTGATGA GAAAGGACGC
ATCGTCAAAG CCGTCGATAA CGAAGGTCGC GACGTGATCT ACGCCGGCAT GAGCAAAATG
TCGAAGTCGA AGAACAACGG CATCGACCCG CAGGTCATGG TAGAGAAATA CGGTGCAGAT
ACCGTTCGTC TGTTCATGAT GTTTGCTTCT CCGGCAGAAA TGACGCTGGA ATGGCAGGAA
TCCGGCGTAG AAGGCGCGAA CCGCTTCCTG AAACGCGTCT GGAGACAAGC CTTTGAGCAC
ACCGAGAAAG GCGCAACAAC GGCGTTGGAT GTCGCTACGC TGACGGAAGA TCAGAAATCA
CTGCGCCGCG ACCTGCACAA AACGATCGCG AAAGTGACCG ATGATATCGG CCGCCGCCAG
ACCTTCAACA CCGCGATCGC CGCCATCATG GAACTGATGA ACAAACTGGC TAAAGCGCCG
CAGGACAGCG ATCAGGATCG TGCACTGACG CAGGAAACGC TGTTGGCCGT TGTTCGTATG
CTCTATCCGT TCACGCCGCA CGTTTGCTTC ACGCTGTGGC AGGCTCTGCA AGGCGAAGGC
GACATCGATA CGGCGCCGTG GCCGGTTGCC GATGAGAGCG CAATGGTTGA AGATTCCAAG
CTGGTTGTTG TGCAGGTGAA CGGTAAAGTA CGTGGTAAAA TTACCGTTGC CGCTGACGCA
AGCGAAGAAC AGGTTCGCGA ACGCGCTGCT CAGGAACCGC TGGTCGCGAA ATATCTGGAC
GGCGTCACGG TTCGTAAAGT GATTTATGTC CCTGGCAAAC TGCTTAACCT GGTTGTGGGT
TAA
|
|---|
| Protein sequence | MQEQYRPEEI EADVQLHWQE KQTFKVTEQP GKEKYYCLSM LPYPSGRLHM GHVRNYTIGD
VISRYQRMLG KNVLQPIGWD AFGLPAEGAA VKNNTAPAPW TYANIDYMKN QLKLLGFGYD
WDREVATCKP DYYRWEQWFF TKLYEKGLVY KKTSAVNWCP NDQTVLANEQ VIDGCCWRCD
TKVERKEIPQ WFIKITAYAD QLLNDLDTLE SWPEQVKTMQ RNWIGRSEGV EITFDVADSA
EKLTVYTTRP DTFMGVTYVA VAAGHPLAAQ AAAANPALAD FIAECRNTKV AEADMATMEK
KGMATGLYAI HPLNGEKVAI WVANFVLMEY GTGAVMAVPG HDQRDWEFAT KYDLSIKPVI
LNADGSEPDL SAEAMTEKGN LFNSGEFDGL DFDAAFNAIA DKLVEKGIGE RKVNYRLRDW
GVSRQRYWGA PIPMVTLEDG TVIPTPEDQL PVILPEDVVM DGITSPLKSN PEWAKTTVNG
QPALRETDTF DTFMESSWYY ARYTCPQYDQ GMLDPAAANY WLPVDQYVGG IEHAIMHLMY
FRFFHKLMRD AGLVTSDEPA KRLLCQGMVL ADAFYYLGNN GERVWVSPID VDVERDEKGR
IVKAVDNEGR DVIYAGMSKM SKSKNNGIDP QVMVEKYGAD TVRLFMMFAS PAEMTLEWQE
SGVEGANRFL KRVWRQAFEH TEKGATTALD VATLTEDQKS LRRDLHKTIA KVTDDIGRRQ
TFNTAIAAIM ELMNKLAKAP QDSDQDRALT QETLLAVVRM LYPFTPHVCF TLWQALQGEG
DIDTAPWPVA DESAMVEDSK LVVVQVNGKV RGKITVAADA SEEQVRERAA QEPLVAKYLD
GVTVRKVIYV PGKLLNLVVG
|
|---|
| |