| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1175 |
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| Symbol | |
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| ID | 8132104 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 1371890 |
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| End bp | 1372855 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644864457 |
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| Product | lipoyl synthase |
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| Protein accession | YP_003016759 |
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| Protein GI | 253687569 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0320] Lipoate synthase |
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| TIGRFAM ID | [TIGR00510] lipoate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000143147 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGTAAAC CGATTCAGAT CGAACGCGGC GTCAAATACC GCGATGCCGA TAAGATGGCG
CTAATCCCGG TACGTACCGT CGTCACCGAA CGCCAAGAGA TTCTGCGCAA ACCTGAATGG
ATGAAGATTA AACTTCCGGC GGATTCGAGC CGTATTCAGG GAATCAAAGC GGCCATGCGC
AAAAACGGGT TGCACTCAGT TTGCGAAGAA GCGTCCTGTC CGAATCTGGC GGAGTGTTTC
AACCACGGCA CCGCCACCTT CATGATTCTG GGCGCCATTT GTACGCGTCG CTGCCCATTC
TGTGACGTTG CCCACGGCCG CCCGCTTACG CCGGATGCCA ACGAGCCAGA GAAACTGGCA
CAGACCATCC ATGACATGGG CTTGCGCTAT GTCGTTATCA CCTCGGTTGA CCGTGATGAC
CTGCGTGACG GTGGAGCACA GCACTTTGCG GACTGCATTA GCGCGATTCG CCGCAAAAAC
CCGAATATCC GCATCGAAAC GCTGGTGCCA GACTTCCGTG GCCGTATGGA TCGCGCGTTA
GAAATTCTGA CCGCCACACC ACCGGATGTG TTCAACCACA ACCTGGAAAA CGTTCCGCGT
GTTTATCGTC AGGTTCGCCC TGGCGCAAAC TATGAGTGGT CACTGAAGCT GCTGGAAAAC
TTCAAAAACG CGCACCCGGA TATCCCGACC AAATCTGGCC TGATGGTTGG ATTGGGGGAA
ACCAATGCTG AAATCGTGGA CGTGATGCGA GACCTGCGCC GCCACGGTGT GACGATGCTG
ACGCTGGGAC AATATTTACA GCCGAGCCGC CATCACCTGC CGGTACAGCG CTACGTCAGC
CCAGATGAAT TTGACGAGAT GAAAGCCGAA GCGATCGCGA TGGGCTTCAC CCACGCGGCA
TGTGGCCCAT TTGTACGCTC GTCTTACCAT GCCGACCTGC AAGCCAAAGG CATCGAAGTA
AAATAA
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| Protein sequence | MSKPIQIERG VKYRDADKMA LIPVRTVVTE RQEILRKPEW MKIKLPADSS RIQGIKAAMR
KNGLHSVCEE ASCPNLAECF NHGTATFMIL GAICTRRCPF CDVAHGRPLT PDANEPEKLA
QTIHDMGLRY VVITSVDRDD LRDGGAQHFA DCISAIRRKN PNIRIETLVP DFRGRMDRAL
EILTATPPDV FNHNLENVPR VYRQVRPGAN YEWSLKLLEN FKNAHPDIPT KSGLMVGLGE
TNAEIVDVMR DLRRHGVTML TLGQYLQPSR HHLPVQRYVS PDEFDEMKAE AIAMGFTHAA
CGPFVRSSYH ADLQAKGIEV K
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