| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1139 |
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| Symbol | |
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| ID | 8132068 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 1331692 |
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| End bp | 1332570 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644864421 |
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| Product | dihydrodipicolinate synthase |
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| Protein accession | YP_003016723 |
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| Protein GI | 253687533 |
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| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
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| TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTACGG GAAGTATTGT TGCGCTGGTT ACGCCGATGG ACGCCAAAGG CGCCGTCGAT
CGGGCGAGCT TGAAAAAACT GATTGATTAT CATGTCGCTA GCGGTACATC GGCGATTGTC
TCTGTCGGCA CGACGGGTGA ATCCGCCACC CTGAGCCATG ACGAACATGG CGATGTCGTG
ATGCTGACGC TGGAGCTGAG CGACGGACGT ATTCCTGTCA TCGCGGGTAC CGGTGCTAAC
GCGACCGCCG AAGGCGTTTC ACTGACCAAA CGTTTTCACG GCACTGGCGT TGTGGGCTGC
CTGACGGTCA CGCCGTACTA CAATAAACCG ACGCAGGAAG GCCTGTACCA GCACTTCAAA
GCGATTGCCG AGCATACCGA TCTGCCGCAA ATCCTGTATA ACGTACCTTC CCGTACTGGC
TGTGACATGC TGCCGGAAAC CGTTGCCCGT TTGTCCGAAG TGAAAAATAT TGTCGCAATT
AAAGAAGCGA CGGGGAACTT AAGTCGGGTA AGCCAGATCC AAGAGCTGGT TAGTGAAGAC
TTCATTTTGC TGAGCGGCGA TGACGCCAGC GGTCTGGACT TTATGCAACT CGGCGGTAAA
GGTGTGATTT CCGTAACGGC GAACATTGCT GCGCGTGAAA TGGCGGAACT TTGCAAGCTG
GCGGCGCAGG GCAATTTTGT CGAAGCGCGC CGTTTAAATC AGCGCCTGAT GCCATTGCAT
CAGAAATTAT TTGTTGAACC CAATCCTATT CCGGTGAAGT GGGCCTGTAA GGAATTGGGA
CTCATGGCGA CCGATACGCT GCGCCTGCCG ATGACACCGC TGACCGATTC CGGTCGTACG
GTAATGGGGC AAGCACTTAA GCAAGCGGGT TTGCTGTAA
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| Protein sequence | MFTGSIVALV TPMDAKGAVD RASLKKLIDY HVASGTSAIV SVGTTGESAT LSHDEHGDVV
MLTLELSDGR IPVIAGTGAN ATAEGVSLTK RFHGTGVVGC LTVTPYYNKP TQEGLYQHFK
AIAEHTDLPQ ILYNVPSRTG CDMLPETVAR LSEVKNIVAI KEATGNLSRV SQIQELVSED
FILLSGDDAS GLDFMQLGGK GVISVTANIA AREMAELCKL AAQGNFVEAR RLNQRLMPLH
QKLFVEPNPI PVKWACKELG LMATDTLRLP MTPLTDSGRT VMGQALKQAG LL
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