| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1121 |
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| Symbol | |
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| ID | 8132050 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 1312565 |
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| End bp | 1313335 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 644864403 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_003016705 |
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| Protein GI | 253687515 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0921359 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAAAAAA CGGTCTTCAT TACGGGTTGT TCCAGCGGTA TTGGCCTGAT TGCCGCTCAG
GATCTGCAAA AGCGCGGCTA TCGCGTGATT GCGGCCTGCC GTCGCGCAGA GGATGTTGCG
CGCCTGAACG CGTTAGGTCT GGAAGCGATT ACGCTCGATC TGGATGACAG CGCCAGCGTT
GAACAAGCCG CCGCAGAGGT GATCAGACTG ACCGATAACC GCCTGTACGG GTTGTTTAAT
AACGCCGGAT ACGGTCTGTA TGGCCCGCTG AATACCATTT CGCGCCAGCA GCTCGAACAG
CAGTTTTCCA GCAACCTGTT CGGCACGCAT CAGCTCACGC AATTACTGCT GCCCGCCATG
CTGCCGCACG GCGAAGGCCG TATCATCCAG ACCAGTTCGG TGTTAGGGCT GGTGTCAACG
CCGGGGCGCG GCGCGTATGC CGCCAGCAAA TATGCGTTGG AAGCGTGGTC AGATGCGCTG
CGCATGGAGT TACACGGCAG CGGCCTGCAC GTCAGCCTGA TCGAGCCCGG CCCAATTAGC
ACACGCTTTA CTCATAACGT GGCTCAAACG CAGACGGACA AGCCGGTGAC CAACCCCGGC
ATCGCTAAGC GTTTCACTCT ACCGCCGGAA GCGATATTGC CGAAGCTCCA TCATGCGCTG
GAAAGTTCGC GGCCTAAATT ACGCTATCCC GTCACGCTGG TGGCTCACGC CTTAACCTGG
CTGCGCCGCC TGCTACCGGG GTGTTTGCTG GATAAAGTAT TACGAGGATA A
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| Protein sequence | MQKTVFITGC SSGIGLIAAQ DLQKRGYRVI AACRRAEDVA RLNALGLEAI TLDLDDSASV
EQAAAEVIRL TDNRLYGLFN NAGYGLYGPL NTISRQQLEQ QFSSNLFGTH QLTQLLLPAM
LPHGEGRIIQ TSSVLGLVST PGRGAYAASK YALEAWSDAL RMELHGSGLH VSLIEPGPIS
TRFTHNVAQT QTDKPVTNPG IAKRFTLPPE AILPKLHHAL ESSRPKLRYP VTLVAHALTW
LRRLLPGCLL DKVLRG
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