Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_1118 |
Symbol | |
ID | 8132047 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 1308551 |
End bp | 1309759 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 644864400 |
Product | aromatic amino acid transporter |
Protein accession | YP_003016702 |
Protein GI | 253687512 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0814] Amino acid permeases |
TIGRFAM ID | [TIGR00837] aromatic amino acid transport protein |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAAAATC GTACTCTTGG CAGTATTTTT ATCGTTGCTG GTACCACAAT TGGAGCAGGA ATGTTGGCGA TGCCGTTGGC AACGGCTGGC GTCGGATTTG GCACGACATT GATGATATTA ATCGGTCTGT GGGCACTGAT GTGTTACAGC GCCCTGCTGC TGGTTGAAGT GTATCAACAT CAGCCATCGC ACACCGGATT AGGCACGTTG GCAAAAATCT ACCTCGGCCG CTGGGGACAA TGGATTACCG GTTTCAGTAT GCTATTTCTG ATGTATGCGC TCACAGCGGC CTACATCAGC GGCGCAGGGG AACTGCTCGC CACGAGCATC AGCCAATGGA GTGGCTATTC ACTTCCGCTA TCCGCCGGTA TTCTACTCTT CACGCTGGTT GCCGGCGGCG TCGTCTGTAT CGGGACGTCC TCCGTCGATT TGTTTAACCG CATTCTGTTT AGCGGCAAAG TGCTCATGCT CGTCATTATG CTGGCCGTCA TGATTCCACA TATTCAGCGT GTAAATCTCT TAACGCTCCC ACTGCAACAG GGTCTGACGC TCTCAGCATT ACCCGTCATT CTGACGTCAT TCGGCTTTCA TGGCAGTATC CCCAGTATTG TGCATTACAT GGGTGGTGAC AGCCGTAAGC TACGCCGGAT ATTTCTTATC GGTAGCGTGA TACCGCTGAT TGCCTACATT TTCTGGCAGC TCGCGATGCT AGGCAGCCTC AGTTCTTCAA CATTCAATGC GATTTTGGCC GATCAGGCGG GGTTAAATGG ACTGATGCAG GCTATTCGTA CGCTGGTGGC TTCACCGCAC GTTGAACTGG CCGTCCACCT GTTTGCCGAT CTGGCGCTGG CGACCTCTTT CCTCGGCGTG GCGCTTGGGC TATTCGATTA TTTAGCCGAC CTGTTTAAGC GTAAAAATAG CGTCACCGGA CGTGCCCAAA CGGGTTTGCT GACCTTTACC CCACCACTGG TGTTTGCACT CTTTTATCCG CAAGGGTTCG TGATGGCGCT GGGTTATGCC GCGATCGCAC TGGCCGTGCT GGCACTGCTT ATTCCCGTCC TGCTGAGCTG GCAGGTGCGC AAACAGCGTC CTGAAATACG TGCGACGCGA GGTGGTGCTC CAGTTCTGGC GCTGGTTTTC GCCAGCGGCG TAGGCATCAT CCTGATCCAA CTGGCGATGG TCGCAGGCTG GCTACCGTCG ATTAGTTAA
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Protein sequence | MKNRTLGSIF IVAGTTIGAG MLAMPLATAG VGFGTTLMIL IGLWALMCYS ALLLVEVYQH QPSHTGLGTL AKIYLGRWGQ WITGFSMLFL MYALTAAYIS GAGELLATSI SQWSGYSLPL SAGILLFTLV AGGVVCIGTS SVDLFNRILF SGKVLMLVIM LAVMIPHIQR VNLLTLPLQQ GLTLSALPVI LTSFGFHGSI PSIVHYMGGD SRKLRRIFLI GSVIPLIAYI FWQLAMLGSL SSSTFNAILA DQAGLNGLMQ AIRTLVASPH VELAVHLFAD LALATSFLGV ALGLFDYLAD LFKRKNSVTG RAQTGLLTFT PPLVFALFYP QGFVMALGYA AIALAVLALL IPVLLSWQVR KQRPEIRATR GGAPVLALVF ASGVGIILIQ LAMVAGWLPS IS
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