Gene PC1_1118 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_1118 
Symbol 
ID8132047 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp1308551 
End bp1309759 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content54% 
IMG OID644864400 
Productaromatic amino acid transporter 
Protein accessionYP_003016702 
Protein GI253687512 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0814] Amino acid permeases 
TIGRFAM ID[TIGR00837] aromatic amino acid transport protein 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAAATC GTACTCTTGG CAGTATTTTT ATCGTTGCTG GTACCACAAT TGGAGCAGGA 
ATGTTGGCGA TGCCGTTGGC AACGGCTGGC GTCGGATTTG GCACGACATT GATGATATTA
ATCGGTCTGT GGGCACTGAT GTGTTACAGC GCCCTGCTGC TGGTTGAAGT GTATCAACAT
CAGCCATCGC ACACCGGATT AGGCACGTTG GCAAAAATCT ACCTCGGCCG CTGGGGACAA
TGGATTACCG GTTTCAGTAT GCTATTTCTG ATGTATGCGC TCACAGCGGC CTACATCAGC
GGCGCAGGGG AACTGCTCGC CACGAGCATC AGCCAATGGA GTGGCTATTC ACTTCCGCTA
TCCGCCGGTA TTCTACTCTT CACGCTGGTT GCCGGCGGCG TCGTCTGTAT CGGGACGTCC
TCCGTCGATT TGTTTAACCG CATTCTGTTT AGCGGCAAAG TGCTCATGCT CGTCATTATG
CTGGCCGTCA TGATTCCACA TATTCAGCGT GTAAATCTCT TAACGCTCCC ACTGCAACAG
GGTCTGACGC TCTCAGCATT ACCCGTCATT CTGACGTCAT TCGGCTTTCA TGGCAGTATC
CCCAGTATTG TGCATTACAT GGGTGGTGAC AGCCGTAAGC TACGCCGGAT ATTTCTTATC
GGTAGCGTGA TACCGCTGAT TGCCTACATT TTCTGGCAGC TCGCGATGCT AGGCAGCCTC
AGTTCTTCAA CATTCAATGC GATTTTGGCC GATCAGGCGG GGTTAAATGG ACTGATGCAG
GCTATTCGTA CGCTGGTGGC TTCACCGCAC GTTGAACTGG CCGTCCACCT GTTTGCCGAT
CTGGCGCTGG CGACCTCTTT CCTCGGCGTG GCGCTTGGGC TATTCGATTA TTTAGCCGAC
CTGTTTAAGC GTAAAAATAG CGTCACCGGA CGTGCCCAAA CGGGTTTGCT GACCTTTACC
CCACCACTGG TGTTTGCACT CTTTTATCCG CAAGGGTTCG TGATGGCGCT GGGTTATGCC
GCGATCGCAC TGGCCGTGCT GGCACTGCTT ATTCCCGTCC TGCTGAGCTG GCAGGTGCGC
AAACAGCGTC CTGAAATACG TGCGACGCGA GGTGGTGCTC CAGTTCTGGC GCTGGTTTTC
GCCAGCGGCG TAGGCATCAT CCTGATCCAA CTGGCGATGG TCGCAGGCTG GCTACCGTCG
ATTAGTTAA
 
Protein sequence
MKNRTLGSIF IVAGTTIGAG MLAMPLATAG VGFGTTLMIL IGLWALMCYS ALLLVEVYQH 
QPSHTGLGTL AKIYLGRWGQ WITGFSMLFL MYALTAAYIS GAGELLATSI SQWSGYSLPL
SAGILLFTLV AGGVVCIGTS SVDLFNRILF SGKVLMLVIM LAVMIPHIQR VNLLTLPLQQ
GLTLSALPVI LTSFGFHGSI PSIVHYMGGD SRKLRRIFLI GSVIPLIAYI FWQLAMLGSL
SSSTFNAILA DQAGLNGLMQ AIRTLVASPH VELAVHLFAD LALATSFLGV ALGLFDYLAD
LFKRKNSVTG RAQTGLLTFT PPLVFALFYP QGFVMALGYA AIALAVLALL IPVLLSWQVR
KQRPEIRATR GGAPVLALVF ASGVGIILIQ LAMVAGWLPS IS