| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1106 |
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| Symbol | |
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| ID | 8132035 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 1292123 |
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| End bp | 1294978 |
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| Gene Length | 2856 bp |
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| Protein Length | 951 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 644864388 |
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| Product | hybrid sensory kinase in two-component regulatory system with RcsB and YojN |
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| Protein accession | YP_003016690 |
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| Protein GI | 253687500 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.615004 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAATATC TCGCCTCATT CCATACCACG TTAAAAGTTT CCCGCTATTT GTTTCGGGTT
CTGGCGATCA TGCTGTGGGT GCTGGGCGCG CTGATATCCG TTTTTTATGT CACTAAAGTA
TTGAATGGAA AAGAGTCAGA ACTGCGGCAG GAGTATAACC TCAGCTTTGA TCAGTCGCAG
GGCTATATTC GACACGCATC GGATATTGTG CGTGAACTCC AGTATCTGGC GGCAAATCGG
CTGGTGCTGG CGCGGGAAAA AGCAGAATCG CCAATGGAAG GAGGCCCTGG AGTCTCCGTT
TATTCGCTTG CGCCCGGTGC AACCTGTTCC ACGCAATATG GCGGGAATGC GGCACTGCTT
TCATTAAGTC ATTTCTTTAA CGGCTGGCAG GATAATTTCT CTGCCGTCTA CGATCTTAAC
CGGGTCTTTT TTGTCGGCGG CGATCGGCGC TGTATGGTTG ATTTTGGCAT CCGTAACCAG
TCGCTCGACC GCGATAACTT GCTTAAAAAC GTGCAGGATC GGTTTCAGGA TCAGAAGAAG
AATCGCACTC AAACCGGGCG CGATGAAACG CTCTATTGGA TTACCCCCGC GTCTATCCCC
GATGTCGGCT ATTTATATGC GCTGACGCCG ATTTATGTGG ATAACAAGCT GGAAGTCATC
ATGGGGATTG AACAGACGAT TCGTCTGGAT GACTTCGTCA CTATAGGTAA ATTCCCGATC
GGGGCGCGGT TGCTGGATCA ATATAATCAG GTGGTTTTGC AGTTTTCCGA TGATAAAGGG
CGTTACGCTT CGTCGGTAGA TGGCTATCCC TCCGATCATA ACTATTTCGG CTATGTGAAT
GGTTATGATG AACTCATTTT GAAGAAGTCG CTGCCGCCGA CGTCATTCAG TATCGTGTAT
TCGCTGCCGT TAAAGGTGCT GCTCTCCCAT ATCAGCGCCT TGATGATCAA TATGCTAGTG
CTGAATATGC TATCGGCTAT CTTGCTGTTT GTGCTGGCGC TGGTGTTTGA GCGGAAAATG
CTGTTGCCAG CGGAAGTGAA TGCGTTCCAG TTGGAAGAGA ACGAGCAATT CAACCGCAAA
ATTGTGGCTT CGGCACCGGT AGGAATTTGT ATCCTGCGTA TCAATGACGG TACGAACATC
CTCAGTAACG AACTGGCGCA TAACTATCTC AACCTGCTGA CCCACGAGGA CAGGCTGCGC
ATTACCCGTA TCATTTGCGA GCAGCAGTCC AAGTTTGTGG ATGTCATGAC CAGCCGCAAT
CATCACCTGC AAATCAGTTT TGTCCATTCG CGCTATCGCA ATGAAAACGT GGCGATTTGT
GTGCTGCTGG ATGTCAGTGC GCGCGTCAAA ATGGAAGAGT CGCTACAGGA AATGGCGAAT
GCCGCCGAGC AGGCAAGCCA GTCTAAATCG ATGTTCCTGG CTACCGTCAG CCATGAGTTG
CGTACGCCGC TGTACGGAAT TATCGGTAAC CTCGATTTAC TGCAAACTAA ATCGCTGCCG
CAGGACGCCA ACCGTCTGGT GGCGGCGATG AACAATTCCT CTTCGCTACT GCTGAAGATC
ATCAGCGATA TTCTCGATTT TTCCAAGATC GAGTCGGAGC AGTTGAAGAT AGAACCTTGT
GAGTTTGCGC CGCATGAGGT TATTAGCCAT ATCACCAGCA ACTATCTTCC ACTGGTGGTG
AAAAAGCGCC TGACGCTGTA CTGCTTTATC GATCCAAAAG TACCGGTCAG CCTGTTTGGC
GATCCTGTAC GTTTGCAGCA GGTATTGTCT AACCTGCTGA GTAATGCCAT CAAGTTTACG
GACACGGGCT GCATCATTTT TGAAGTTGGC TGCCGCGATG GCTATCTGGA ATTTGTGGTG
CGTGATACCG GTGTAGGGAT TCAACCCCGC GAGGCGGTGA AGCTGTTTGA TCCGTTCTTC
CAAGCGGGGA GCGGCGTTCA GCGTCATTTT CAGGGGACGG GGCTAGGGCT GGCAATTTGT
GAAAAGCTGG TCAATCTGAT GGATGGAGAC ATTACCATCG AGTCGGAACC GGGGCTCGGT
AGCCTGTTTG GCGTCAGAAT CCCGCTGTAT AAAGCACGTT ATGCGCCTGC GGCGATCAAT
GCCAGCCTGC AAGGGAAGAT GTGCTGGTTG AGAATACGTA ATGCCCGACT GGAAGCTTAT
CTGCTGACGC TGTTGCAGGA TCAGGGATTG CAGGTGGCGC GCTATCAGAA TCAAACCGTG
TCGCCTGATG ATGTGATGAT TAGCGATTAT GTGTCAGAAG AGGACGTCAC TGTTCGGGCA
CATATTGTAA TGAGCGGCGC CCATAATGGG GCCGCGCAGG AAGTGAGTGC GGGACACTGG
GTACAAGGGA CATCCACACC TCAACATCTG CCCGATTTGC TGGAGAAAAT CTATCGTTCA
GAAAACGAGG ACAGAACGCA CACCGAGATT TCACCGCCGC TGGCCAGCTA TGTGCGGGAT
GAGAATGGCG ACATTATGAT TCTCGTGGTT GACGATCACC CCATCAACCG CCGACTGCTG
GCGGATCAGC TGGGTTCTCT GGGCTATCAG GCCATAACAG CAAATGATGG CGTCGATGCG
CTGGGTGTAT TGAGCAAAAA TCATATCGAT ATCGTACTGA CGGATGTCAA TATGCCGAAT
ATGGATGGTT ATCTGTTTAC ACAGCGCATG CGCGAGCAGG GATTACGCTT CCCGGTTATC
GGCGTGACGG CGAATGCATT GGCAGAAGAA AGGGAACGTT GCCTCGGCGC GGGGATGGAT
AACTGTTTGT CAAAACCGGT TACGCTGGAT ACCTTGCAGC AGGCGCTGGC GTATTACAGT
AACGTGGTGC GTCAGGCGAG AACATCTGGG GAATAA
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| Protein sequence | MKYLASFHTT LKVSRYLFRV LAIMLWVLGA LISVFYVTKV LNGKESELRQ EYNLSFDQSQ
GYIRHASDIV RELQYLAANR LVLAREKAES PMEGGPGVSV YSLAPGATCS TQYGGNAALL
SLSHFFNGWQ DNFSAVYDLN RVFFVGGDRR CMVDFGIRNQ SLDRDNLLKN VQDRFQDQKK
NRTQTGRDET LYWITPASIP DVGYLYALTP IYVDNKLEVI MGIEQTIRLD DFVTIGKFPI
GARLLDQYNQ VVLQFSDDKG RYASSVDGYP SDHNYFGYVN GYDELILKKS LPPTSFSIVY
SLPLKVLLSH ISALMINMLV LNMLSAILLF VLALVFERKM LLPAEVNAFQ LEENEQFNRK
IVASAPVGIC ILRINDGTNI LSNELAHNYL NLLTHEDRLR ITRIICEQQS KFVDVMTSRN
HHLQISFVHS RYRNENVAIC VLLDVSARVK MEESLQEMAN AAEQASQSKS MFLATVSHEL
RTPLYGIIGN LDLLQTKSLP QDANRLVAAM NNSSSLLLKI ISDILDFSKI ESEQLKIEPC
EFAPHEVISH ITSNYLPLVV KKRLTLYCFI DPKVPVSLFG DPVRLQQVLS NLLSNAIKFT
DTGCIIFEVG CRDGYLEFVV RDTGVGIQPR EAVKLFDPFF QAGSGVQRHF QGTGLGLAIC
EKLVNLMDGD ITIESEPGLG SLFGVRIPLY KARYAPAAIN ASLQGKMCWL RIRNARLEAY
LLTLLQDQGL QVARYQNQTV SPDDVMISDY VSEEDVTVRA HIVMSGAHNG AAQEVSAGHW
VQGTSTPQHL PDLLEKIYRS ENEDRTHTEI SPPLASYVRD ENGDIMILVV DDHPINRRLL
ADQLGSLGYQ AITANDGVDA LGVLSKNHID IVLTDVNMPN MDGYLFTQRM REQGLRFPVI
GVTANALAEE RERCLGAGMD NCLSKPVTLD TLQQALAYYS NVVRQARTSG E
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