Gene PC1_1093 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_1093 
Symbol 
ID8132022 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand- 
Start bp1276254 
End bp1276733 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content53% 
IMG OID644864375 
Producthypothetical protein 
Protein accessionYP_003016677 
Protein GI253687487 
COG category[S] Function unknown 
COG ID[COG2606] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00011] ybaK/ebsC protein 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACCCG CAGTCAATCT GCTCGAAAAG AATAAGGTCG CTTTTACGTT ACACAGCTAC 
CACCACGACA GCGATGAAAC CAACTTTGGC GAGGAAGCGG CCAGAAAGCT GGGACTGAAT 
AAAGAACAGG TTTATAAAAC GCTGCTCGTT TCCCTGAATG GTGATGCGAA GAATCTCGCC 
GTGGCCGTCA CGCCGGTCTC AGGAATGCTG GATCTCAAGA AAGTTGCTCG CGCGCTGTCG 
GCCAAAAAAG CCGATATGGC CGATCCGATT ATCGCTCAGC GTGTCACAGG TTATCTGGTA 
GGAGGAATCA GCCCGCTGGG GCAAAAGAAA CTGCTGCCGA CCGTGATTGA TGAACCGGCA 
CGCCAGTTCG AGACCATTTT CATTTCCGGC GGTAAGCGCG GTCTGGATAT TGAGCTATCG 
GCAGACGATC TGGCGCGACT GCTACGCGCC ACCTTTGCTG ATATCGCCAA GCATGATTAA
 
Protein sequence
MTPAVNLLEK NKVAFTLHSY HHDSDETNFG EEAARKLGLN KEQVYKTLLV SLNGDAKNLA 
VAVTPVSGML DLKKVARALS AKKADMADPI IAQRVTGYLV GGISPLGQKK LLPTVIDEPA 
RQFETIFISG GKRGLDIELS ADDLARLLRA TFADIAKHD