Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_1084 |
Symbol | |
ID | 8132013 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 1261352 |
End bp | 1263379 |
Gene Length | 2028 bp |
Protein Length | 675 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 644864367 |
Product | coagulation factor 5/8 type domain protein |
Protein accession | YP_003016669 |
Protein GI | 253687479 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00047148 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAGCG TAAATATTGA AATCAATGTC TGTGGCAGCG CAGAAAAATC AACGTGTGTT GTTAATCCCC CAATTCAGAT CAATCCTCAC ACCTGTTGCC AGGTGGATAC GGATAATCAG TGCGAACCGC AACCTGGCGT TTCCGGTGTT GCCTCCGTAT TCGGACGGAC TGGCGTTGTC ACTGCACAAT CAGGCGACTA TACGGCCGAT CAGATTACGG AAACGGACAC CAGAAAATTT GCCTCGTCGG ATGAAAAAGC GGTCTGGAAT GCAAAGCAGG ATGCATTAAT TTCCGGTACC ACTATCCGCA CGCTCTTTGG GCAGTCGCTG CTGGGCAGCG GTGATCTTTC ACCTACGCCA GCGCAAATGG GTGTCGCGGC GGTTGGGCAT ACTCACACCA CAGCGGACAT CACCGACTAC ACATCAAAAA CGAAGCAGCT CATTCATTCC TCGCTGGAAG CCGGGGCGGG CGTCACGCTG AGCTATAACC CGGTGAATGA GAAAACCATT ATCAGCGCTG CAGGCGGTGG TTCGGGTTCG GGTACGGGCG GTTCTGGTTA TATCGTAGCC GATCGTCAGG GCGCAACGGC GGGGCAAAAT CACGCGTTCA GCATTAGCCC ACAAAGCATG TTTAATCTCG CGGCGTATGC GCTGAAAGAA GTCGCTGGCG CAGCGAATCA GACTTATGTT GTTGACGATT TCGGCGTGTC TAGCGAAGAG AACTACAACG TAACTCATGC TGCTGTTTTT GATAATACAT TACTCCCCTA TGTCGGAAAG CTATATAACC TGGTGCAATC CGGTAATTTT TATTCGTCAC CAATTAAATC AGACGGTGAA AGCATTGAAA TTGATGCTGT TAATAAAACG CTGATTCCTG TGATGACAGC AAATAATAGT GCAGTTGGCT ACACGGTTGA CGCATCGTCT GAGTATTCAG TGCAATACGC GGCGTGGACA GCATTCAACG GAACGTTAAA TCGATACTGG GCATCCAAAA CCGTACCAAC AGTGGCTAAC CCACATTGGC TGCGTATTAC TATGGCGGCT CCTGCATTAA TTGATACATA CAGAATAACA AACGAAAACC TGAATCCTGG GCCACTCAGC CCGAAATCGT GGACGTTTCA GGGGAGTAAT GATGGTACAA CGTGGCATAC ATTACATACG GTATCTAATG ATACTCGCGA TGGGAAGGGG GCGGTTCGAG AATATACGTT CACCAATGAC ACGCCGTATT CATCATTCCG TATTTTAATA ACCGAGCAAA ATGCTGGTCC ACACGTTCAA ATTGGGGAGC TTGAAATATT CCGCAGAGAG CGACTGTTGA TTAACGGCAG TGATGGTAAG TGGTATTCAG CGAATAATGG AGTATTAACA TCGGTCCCAG CACCATCTGT GGCGGAAGAT TTTTATAATA ATGGTTTTTT GTCATCTGGC GTAATATCTG AATCATCATT GTCAGGAATA CAGCCAGTAA CGATTTTTTC ATCAAAAAAT ATTGATGCAA AAGTGCTATA TACACCGCCT CCTCAAATTG CAATACAGAA AGCCCTGTCG AGCGCGGCGT TATGGCCACA AATTAACTCC GCAGTGCTGA CAGCTACGCA AACCGGCAAC GGTAAAGTGC GTGTCGCTGT GACGCGGGAC TTGGTTAACT GGCATGTGTG GCGGAGCGGG GCGTGGGTTG ATGTGGGGGC GTTGTCAGTA GATACGGCGG GCGCAACGAA ACTGATTGCA GACGGCATGA CGCCAGCTGA ACTCGGTGCT ATTACGGCGG CACAGTGGAC ACAGCTGTTT GCATCCAATA ACGCTGTGCC GGACTCACTT GCCTTTGCCT TCGCGCTTGA TATCACCGAT CCAGCGACTG ATATCGCGGC TGTTGACCGA CTGGTGCTGA ACGTCAACGA TGCGTCCAGT TGGAAACTGC AGTCCCCTGC GGAAGTGGAA ATCCGCTGGC GCACGGACAG TGTGACATTC CGCACCGTAA CGGCAGGCAA TTACAAGCTG GCGTATCAGG TTCCGTAA
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Protein sequence | MKSVNIEINV CGSAEKSTCV VNPPIQINPH TCCQVDTDNQ CEPQPGVSGV ASVFGRTGVV TAQSGDYTAD QITETDTRKF ASSDEKAVWN AKQDALISGT TIRTLFGQSL LGSGDLSPTP AQMGVAAVGH THTTADITDY TSKTKQLIHS SLEAGAGVTL SYNPVNEKTI ISAAGGGSGS GTGGSGYIVA DRQGATAGQN HAFSISPQSM FNLAAYALKE VAGAANQTYV VDDFGVSSEE NYNVTHAAVF DNTLLPYVGK LYNLVQSGNF YSSPIKSDGE SIEIDAVNKT LIPVMTANNS AVGYTVDASS EYSVQYAAWT AFNGTLNRYW ASKTVPTVAN PHWLRITMAA PALIDTYRIT NENLNPGPLS PKSWTFQGSN DGTTWHTLHT VSNDTRDGKG AVREYTFTND TPYSSFRILI TEQNAGPHVQ IGELEIFRRE RLLINGSDGK WYSANNGVLT SVPAPSVAED FYNNGFLSSG VISESSLSGI QPVTIFSSKN IDAKVLYTPP PQIAIQKALS SAALWPQINS AVLTATQTGN GKVRVAVTRD LVNWHVWRSG AWVDVGALSV DTAGATKLIA DGMTPAELGA ITAAQWTQLF ASNNAVPDSL AFAFALDITD PATDIAAVDR LVLNVNDASS WKLQSPAEVE IRWRTDSVTF RTVTAGNYKL AYQVP
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