| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1082 |
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| Symbol | |
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| ID | 8132011 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 1257113 |
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| End bp | 1258798 |
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| Gene Length | 1686 bp |
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| Protein Length | 561 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644864365 |
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| Product | putative cation:proton antiport protein |
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| Protein accession | YP_003016667 |
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| Protein GI | 253687477 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4651] Kef-type K+ transport system, predicted NAD-binding component |
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| TIGRFAM ID | [TIGR00932] transporter, monovalent cation:proton antiporter-2 (CPA2) family |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0321782 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATGCTG CAACACCGCT AATTTCTACT ATCGCTGGAG GGCTGGTTCT TGCCTTCCTC
CTTGGCATTC TGGCAAATCG CCTGCGAATC TCCCCCCTTG TTGGTTACCT TGCCGCAGGT
GTCCTTGTCG GTCCTTTTAC CCCTGGTTTT GTCGCTGATA CCTCACTGGC ATCAGAGCTG
GCTGAGCTTG GCGTCATTCT GCTGATGTTT GGCGTTGGCC TGCACTTCTC GCTGAAAGAC
CTCATGGCGG TAAAGTCCAT CGCCATTCCC GGAGCGATAG CCCAGATTGC CGTGGCGACG
CTGCTTGGAA TGGGATTATC CGCCATGCTG GGCTGGAGCC TGGCGAGCGG TCTGGTTTTC
GGCCTCTGTC TGTCCACCGC CAGTACCGTG GTTCTGCTAC GCGCGCTGGA AGAACGACAG
CTTATTGATA GCCAGCGCGG CCAAATCGCC ATCGGCTGGC TGATTGTGGA AGATCTGGCG
ATGGTGCTTA CGCTGGTTCT GCTGCCAGCC TTCGGCGACA TGATCGGCGC TGAGCATGCC
GACACCAGCA AGCTGCTGGC CGATTTAGCC TGGACCATCG GCAAGGTGAT TGCCTTTATC
ACCCTGATGA TTGTCGTCGG TCGCCGTCTG GTACCGTGGG TGTTGGCAAA AAGCGCCAGC
ACCGGCTCAC GCGAGCTTTT CACGCTGGCA GTGTTAGCCA TGGCACTGGG TATCGCCTTC
GGCGCAGTGA AACTGTTTGA TGTCTCCTTT GCACTGGGCG CATTCTTTGC CGGCGTGGTG
CTAAACGAAT CAGAACTCAG CCAGCGTGCG GCGCACGATA CGCTGCCGCT GCGCGATGCT
TTCGCCGTCC TGTTCTTCGT GTCTGTCGGT ATGCTGTTTG ATCCGATGAT CCTGCTGAAC
GACCCAATTT CCGTGCTGAT CACTCTGGCC ATTATTGTGT TCGGTAAGTC AGCCGCCGCT
TTCGTGCTGG TTCGACTCTT TGGCCACTCA AAACGAACAG CATTAACGAT TTCCGCTAGT
CTGGCGCAGA TCGGAGAGTT TGCCTTTATT TTGGCCGGGC TCGGCATTGT GTTGGGGCTA
CTGTCAGAAG AAGGTCGGAA TCTGGTACTG GCCGGCGCCA TTCTCTCCAT CATGATAAAC
CCACTGTTGT TTACGCTTCT TGAACGCTAT CTGGCGAAGC ATGAAACCAT CGAAGAGCAG
ATCGTGGAAG AAGCGATTGA GGAAGAGAAA CAGATTCCTG TCGATATGTG CAACCATGCG
CTGCTGGTCG GCTATGGTCG CGTAGGTAGC CTGATTGGCG CCAAATTGCA TCAGGCAGGG
ATTCCTATCG TGGTCATTGA GAATTCACGT ACCCGCGTTG ATGCCTTGCG TGAACAGGGT
ATTAAAGCGG TATTGGGTAA CGCCACTAAG CCTGAAATAA TGGACATTGC GCGTCTGGAC
TGCGCCCGCT GGCTATTGCT GACGATTCCG AACGGTTATG AAGCCGGAGA AATCGTCGCA
GCAGCCCGTG AGAAACGCGC CGATCTGGAG ATTATCGCCC GCGCGCACTA TGACGATGAG
GTCAGCTACA TTACCGAGCA CGGTGCCAAC GAGGTGGTCA TGGGCGAGCG GGAAATCGCC
AATAGCATGA TCACGCTGCT GAAGCTGGAT GAGATCCCTC CTGCACCTCA GGCGTGCCCT
ATCTAA
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| Protein sequence | MHAATPLIST IAGGLVLAFL LGILANRLRI SPLVGYLAAG VLVGPFTPGF VADTSLASEL
AELGVILLMF GVGLHFSLKD LMAVKSIAIP GAIAQIAVAT LLGMGLSAML GWSLASGLVF
GLCLSTASTV VLLRALEERQ LIDSQRGQIA IGWLIVEDLA MVLTLVLLPA FGDMIGAEHA
DTSKLLADLA WTIGKVIAFI TLMIVVGRRL VPWVLAKSAS TGSRELFTLA VLAMALGIAF
GAVKLFDVSF ALGAFFAGVV LNESELSQRA AHDTLPLRDA FAVLFFVSVG MLFDPMILLN
DPISVLITLA IIVFGKSAAA FVLVRLFGHS KRTALTISAS LAQIGEFAFI LAGLGIVLGL
LSEEGRNLVL AGAILSIMIN PLLFTLLERY LAKHETIEEQ IVEEAIEEEK QIPVDMCNHA
LLVGYGRVGS LIGAKLHQAG IPIVVIENSR TRVDALREQG IKAVLGNATK PEIMDIARLD
CARWLLLTIP NGYEAGEIVA AAREKRADLE IIARAHYDDE VSYITEHGAN EVVMGEREIA
NSMITLLKLD EIPPAPQACP I
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