Gene PC1_1079 details

Gene Information

• Locus tag: PC1_1079
• ID: 8132008
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium carotovorum subsp. carotovorum PC1
• Kingdom: Bacteria
• Replicon accession: NC_012917
• Strand: +
• Start bp: 1252902
• End bp: 1254791
• Gene Length: 1890 bp
• Protein Length: 629 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 644864362
• Product: heat shock protein 90
• Protein accession: YP_003016664
• Protein GI: 253687474
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0326] Molecular chaperone, HSP90 family

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.0217188
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTATGA AAGGCCAAGA AACTCGCGGG TTCCAGTCCG AAGTTAAGCA ACTCCTGCAT 
TTGATGATCC ATTCGCTCTA TTCCAATAAA GAAATTTTTC TGCGTGAATT GATCTCCAAC 
GCCTCTGATG CGGCAGACAA GCTACGTTTC CGTGCGCTGT CCACGCCAGA ACTGTATGCG 
GGCGATGGCG ACCTGCGTGT ACGCGTGTCC ACGGATAAAG AAAAACGTAC GCTGACGATT 
TCTGACAACG GCATCGGCAT GAGCCGTGAC GAAGTGATTG ATAATCTGGG TACGATTGCG 
AAATCCGGCA CCAAGGCGTT TCTGGAATCC ATGGGTTCTG ATCAGGTTAA AGATAGCCAA 
CTGATTGGCC AGTTCGGTGT GGGTTTCTAT TCCGCTTTCA TCGTGGCGGA TAAAGTGACT 
GTGCGTACCC GCGCAGCGGG TGCAAATGCC GATCAAGGCG TGTATTGGGA ATCCGCTGGG 
GAAGGGGATT ACACCATTGC CGACATCACC AAAGACGAAC GTGGAACGGA AATCACTCTG 
CATCTGCGTG AAGGTGAAGA CGAGTTTCTC GATGACTGGC GTGTGCGTTC CGTCATCAGC 
AAATACTCCG ACCATATTGC GCTGCCGGTA GAAATCGAAT CTCAGACGGA AAGTGAAGAA 
GAAGGCGGCG AGTCCACGGT TAGCTGGGAA AAAATTAACA AGGCTCAAGC CCTGTGGACG 
CGCAGTAAAT CTGAAGTCAG CGATGATGAG TACAACGAAT TCTATAAGCA CATCTCCCAT 
GACTTTACCG ATCCGCTGAG CTGGAGCCAC AACCGTGTGG AAGGCAAGCA GGAATACACC 
AGCCTGCTTT ATATCCCTGC TCGTGCACCG TGGGATATGT GGAACCGCGA TCATAAACAC 
GGCCTGAAAT TGTACGTTCA GCGCGTCTTC ATTATGGATG ACGCCGAACA GTTCATGCCT 
AACTACCTGC GCTTTGTTCG TGGCCTGATT GATTCCAACG ATCTGCCGCT GAACGTTTCC 
CGTGAGATTC TGCAGGACAG CCGTGTGACG CAAAATCTGC GTAATGCGCT GACTAAGCGT 
GTGCTGCAAA TGCTGGATAA GCTGGCGAAA GACGACGCGG AAAAATACCA GACGTTCTGG 
CAACAATTTG GTCTGGTGCT GAAAGAAGGC CCGGCGGAAG ATGGCAGCAA CCGTGAAGCC 
ATTGCGAAAC TGCTGCGTTT TGCTACCACG CAATCTGACA GTTCCGCGCA GACGGTGTCA 
CTGGAAGATT ACGTTAGCCG GATGGTGGAA GGTCAGGACA AGATCTACTA CATCACCGCA 
GATAGCTATG CGGCGGCGAA GAGCAGCCCA CACCTGGAGC TGTTCCGTAA GAAAGGTATC 
GAGGTATTGT TGTTGTCCGA GCGCATTGAC GAGTGGATGA TGAGCTACCT GACCGAGTTT 
GACGGTAAAT CCTTCCAGTC TGTCAGCAAA GCGGACGAGG CGCTGGATAA ACTGGCCGAC 
GAAGAAAACG AGGAACAGAA AGAAGCACAG AAAGCGCTGG AGCCGTTTGT TGATCGTGTG 
AAAACGTTGC TGGGTGAGCG CGTTAAAGAC GTGCGCTTCA CCTACCGTTT GACCGATACG 
CCTGCGATTG TCGTGACGGA TGCGGACGAG ATGAGTACGC AGATGGCGAA GCTGTTCGCC 
GCAGCGGGCC AACAGGCACC GGAAGTGAAG TACATTTTTG AACTGAACCC GGAACACGCG 
TTAATTAAAC GTGCTGCCGA CGTTTCTGAT GAAGCGGAGT TTGGCGAGTG GGTTGAGCTG 
CTGCTGGATC AGGCTCTGCT GGCCGAGCGT GGGACATTGG ACGACCCGAA CTTGTTCATT 
CGTCGTATGA ATCAGCTGCT AAGTGCCTGA 

 

Protein sequence

MSMKGQETRG FQSEVKQLLH LMIHSLYSNK EIFLRELISN ASDAADKLRF RALSTPELYA 
GDGDLRVRVS TDKEKRTLTI SDNGIGMSRD EVIDNLGTIA KSGTKAFLES MGSDQVKDSQ 
LIGQFGVGFY SAFIVADKVT VRTRAAGANA DQGVYWESAG EGDYTIADIT KDERGTEITL 
HLREGEDEFL DDWRVRSVIS KYSDHIALPV EIESQTESEE EGGESTVSWE KINKAQALWT 
RSKSEVSDDE YNEFYKHISH DFTDPLSWSH NRVEGKQEYT SLLYIPARAP WDMWNRDHKH 
GLKLYVQRVF IMDDAEQFMP NYLRFVRGLI DSNDLPLNVS REILQDSRVT QNLRNALTKR 
VLQMLDKLAK DDAEKYQTFW QQFGLVLKEG PAEDGSNREA IAKLLRFATT QSDSSAQTVS 
LEDYVSRMVE GQDKIYYITA DSYAAAKSSP HLELFRKKGI EVLLLSERID EWMMSYLTEF 
DGKSFQSVSK ADEALDKLAD EENEEQKEAQ KALEPFVDRV KTLLGERVKD VRFTYRLTDT 
PAIVVTDADE MSTQMAKLFA AAGQQAPEVK YIFELNPEHA LIKRAADVSD EAEFGEWVEL 
LLDQALLAER GTLDDPNLFI RRMNQLLSA