Gene PC1_1075 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_1075 
Symbol 
ID8132004 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand+ 
Start bp1249063 
End bp1249620 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content55% 
IMG OID644864358 
Productadenine phosphoribosyltransferase 
Protein accessionYP_003016660 
Protein GI253687470 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0503] Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins 
TIGRFAM ID[TIGR01090] adenine phosphoribosyltransferase 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.00248791 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGACCG TAACAGCGCA GCAGCAGGCA GAATTAATTA AAAACAGTAT CAAAAGCATC 
CCCGATTATC CGAAGCCGGG CATACTGTTC CGTGATGTCA CCAGCCTGCT GGAAGATCCT 
GTGGCCTATG CGGCCAGTAT TGAGATGCTG GCGAACCGTT ACCGCAACAG CGGCGTGACG 
AAGGTTGTCG GTACGGAAGC GCGTGGTTTT CTGTTTGGCG CACCGGTTGC TTTAGCGCTG 
GGCGTGGGTT TTGTTCCCGT GCGTAAACCG GGCAAGCTGC CACGTCCGAC GATCAGCGAA 
AGCTATGAAC TCGAGTATGG TTCAGATACG CTGGAAATCC ATTCAGATGC GATCTCTGCT 
GGCGATAATG TGCTGGTGAT CGACGATCTG CTGGCAACGG GCGGCACGCT CGAAGCGACG 
GTGAAACTGA TTCGTCGTCT GGGCGGTACG GTCAACGATG CCGCTTTTAT CATTAACTTG 
TTCGATCTGG GCGGCGAGCA ACGCCTGACC GGGATGGGTG TCACCTGCTA TAGTCTGGTT 
GACTTCCCCG GACATTAA
 
Protein sequence
MMTVTAQQQA ELIKNSIKSI PDYPKPGILF RDVTSLLEDP VAYAASIEML ANRYRNSGVT 
KVVGTEARGF LFGAPVALAL GVGFVPVRKP GKLPRPTISE SYELEYGSDT LEIHSDAISA 
GDNVLVIDDL LATGGTLEAT VKLIRRLGGT VNDAAFIINL FDLGGEQRLT GMGVTCYSLV 
DFPGH