Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_1074 |
Symbol | |
ID | 8132003 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 1248454 |
End bp | 1248849 |
Gene Length | 396 bp |
Protein Length | 131 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 644864357 |
Product | hypothetical protein |
Protein accession | YP_003016659 |
Protein GI | 253687469 |
COG category | [S] Function unknown |
COG ID | [COG2832] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00236568 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTATCGCG TGTTGTTGAT TATATTGGGG TGGGTTTCCG TTGTGCTGGC AACGTTGGGC GTCGTGTTAC CTTTATTGCC AACTACGCCT TTCTTGTTAC TGGCCGCCTG GTGTTTTGCC CGCTCATCCC CGCGTTTCCA TGACTGGCTA CTGTACCGTT CGTGGTTTGG CAGCTACTTG CGCCATTGGC AGCAACATCG GGCACTGCCG CCGGGGGCAA AATGGAAGGC AGTCACCATG ATTCTGTTAA CGTTTGCGCT TTCGCTCTGG CTGGTTAAGC TGGTTTGGGT CAGGATTTTG CTATTGGTCA TTTTGGCTAT TTTGTTGACC TTTATGCTTC GTTTACCCGT GCTTGATCCA GAGCAACAAA CGCAGGGCGC GAATCCGAAA AGATAG
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Protein sequence | MYRVLLIILG WVSVVLATLG VVLPLLPTTP FLLLAAWCFA RSSPRFHDWL LYRSWFGSYL RHWQQHRALP PGAKWKAVTM ILLTFALSLW LVKLVWVRIL LLVILAILLT FMLRLPVLDP EQQTQGANPK R
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