Gene PC1_1068 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_1068 
SymbolrpmE2 
ID8131997 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp1241815 
End bp1242063 
Gene Length249 bp 
Protein Length82 aa 
Translation table11 
GC content48% 
IMG OID644864351 
Product50S ribosomal protein L31 type B 
Protein accessionYP_003016653 
Protein GI253687463 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0254] Ribosomal protein L31 
TIGRFAM ID[TIGR00105] ribosomal protein L31 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.788899 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGCAG GTATTCATCC TGACTACCGC ACGGTGGTAT TTCACGATAC CAGCGCAGAT 
GTCTATTACA GGACGGGCTC AACAATTAAA ACCGATCGAA CCATTGAACT GGAGGGTACC
AGCTACCCTT ACGTCACCAT TGACGTTTCT TCGGCATCGC ATCCCTATTA CACCGGGAAG
CAAAAAGAAT ATTCCAAAGA AGGCAGCACA GCGCGCTTCC AGCAGCGCTT TGGGAACTTC
TTCAAGTAA
 
Protein sequence
MKAGIHPDYR TVVFHDTSAD VYYRTGSTIK TDRTIELEGT SYPYVTIDVS SASHPYYTGK 
QKEYSKEGST ARFQQRFGNF FK