Gene PC1_1053 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_1053 
Symbol 
ID8131982 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand+ 
Start bp1228224 
End bp1228589 
Gene Length366 bp 
Protein Length121 aa 
Translation table11 
GC content51% 
IMG OID644864336 
Productcompetence protein ComEA helix-hairpin-helix repeat protein 
Protein accessionYP_003016638 
Protein GI253687448 
COG category[L] Replication, recombination and repair 
COG ID[COG1555] DNA uptake protein and related DNA-binding proteins 
TIGRFAM ID[TIGR00426] competence protein ComEA helix-hairpin-helix repeat region
[TIGR01259] comEA protein 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAT CAGGAATAAA AGCACTGTGC TTAATCATTG GGATGAGTTT ATCTGGGGTG 
CCATTATTAG GGCAGGCGGC GTCTAAAGCC GCCGACGGTA CGGCGACGGC GGTGAAGTCT 
GCACCAGCAG ATCAGAAAGT GGAAAAAGCA ACGCTTCCTG ATGGCGATGA GGATAAGGTG 
AGCATCAATG CGGCAAGCGC TGCCGAGTTG GCCGAGATAA TGAACGGCGT CGGGCTGAAA 
AAAGCGGAAG CGATAGTGCA CTACCGTGAG CAAAATGGTC CTTTTACCCA GATCGAGCAA 
TTAACTGAGG TATCAGGAAT TGGGGCGGCG TTGGTTGAGC GCAATCTCTC TCGTTTGAAA 
CTGTGA
 
Protein sequence
MKKSGIKALC LIIGMSLSGV PLLGQAASKA ADGTATAVKS APADQKVEKA TLPDGDEDKV 
SINAASAAEL AEIMNGVGLK KAEAIVHYRE QNGPFTQIEQ LTEVSGIGAA LVERNLSRLK 
L