Gene PC1_1051 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_1051 
Symbol 
ID8131980 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp1225586 
End bp1225858 
Gene Length273 bp 
Protein Length90 aa 
Translation table11 
GC content48% 
IMG OID644864334 
Producttranscriptional regulator HU subunit beta 
Protein accessionYP_003016636 
Protein GI253687446 
COG category[L] Replication, recombination and repair 
COG ID[COG0776] Bacterial nucleoid DNA-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.593082 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAACAAGT CACAATTGAT CGACAAAATT GCCGCAGATG CTGATATTTC CAAAGCGGCA 
GCAGGGCGTG TGTTAGATGC AATTATTGGT TCCGTTACCG AATCCCTGAA AGAAGGGGAT
GATGTTGCTT TGGTTGGTTT TGGTACTTTC TCAGTGCGTG AACGTGCTGC TCGTACCGGC
CGTAACCCGC AAACTGGTAA GGAAATCAGT ATCCCTGCAG CAAAAGTACC AGGATTCCGT
GCTGGTAAGA CGCTGAAAGA CGCCGTTAAC TGA
 
Protein sequence
MNKSQLIDKI AADADISKAA AGRVLDAIIG SVTESLKEGD DVALVGFGTF SVRERAARTG 
RNPQTGKEIS IPAAKVPGFR AGKTLKDAVN