Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_1051 |
Symbol | |
ID | 8131980 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 1225586 |
End bp | 1225858 |
Gene Length | 273 bp |
Protein Length | 90 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644864334 |
Product | transcriptional regulator HU subunit beta |
Protein accession | YP_003016636 |
Protein GI | 253687446 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0776] Bacterial nucleoid DNA-binding protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.593082 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAACAAGT CACAATTGAT CGACAAAATT GCCGCAGATG CTGATATTTC CAAAGCGGCA GCAGGGCGTG TGTTAGATGC AATTATTGGT TCCGTTACCG AATCCCTGAA AGAAGGGGAT GATGTTGCTT TGGTTGGTTT TGGTACTTTC TCAGTGCGTG AACGTGCTGC TCGTACCGGC CGTAACCCGC AAACTGGTAA GGAAATCAGT ATCCCTGCAG CAAAAGTACC AGGATTCCGT GCTGGTAAGA CGCTGAAAGA CGCCGTTAAC TGA
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Protein sequence | MNKSQLIDKI AADADISKAA AGRVLDAIIG SVTESLKEGD DVALVGFGTF SVRERAARTG RNPQTGKEIS IPAAKVPGFR AGKTLKDAVN
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