Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_1049 |
Symbol | clpX |
ID | 8131978 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 1221541 |
End bp | 1222815 |
Gene Length | 1275 bp |
Protein Length | 424 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 644864332 |
Product | ATP-dependent protease ATP-binding subunit ClpX |
Protein accession | YP_003016634 |
Protein GI | 253687444 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1219] ATP-dependent protease Clp, ATPase subunit |
TIGRFAM ID | [TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX) |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00100096 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAGATA AGCGCAAAGA CGGTTCAGGA AAGTTACTGT ACTGCTCTTT TTGCGGCAAG AGCCAGCATG AAGTGCGTAA GCTGATTGCC GGGCCGTCGG TGTATATCTG CGATGAATGT GTTGACTTGT GTAACGACAT TATTCGCGAA GAAATTAAAG AAGTGGCGCC CCATCGTGAG CGCAGTGCGT TGCCGACGCC ACACGAAATT CGCCGCCACC TTGACGATTA TGTTATTGGT CAAGAGCAGG CCAAGAAGGT GTTGGCCGTT GCGGTGTATA ACCACTACAA ACGCTTGCGT AATGGTGACA GCAGCAACGG GATCGAACTG GGTAAAAGTA ACATCCTGCT GATTGGTCCT ACCGGGAGCG GTAAAACGCT GCTGGCTGAA ACGCTGGCGC GCTTCCTGGA TGTACCATTC ACCATGGCGG ATGCCACGAC GCTGACCGAA GCAGGTTACG TCGGTGAAGA CGTTGAAAAC ATCATTCAGA AGCTGTTGCA GAAGTGTGAT TACGATGTGC AGAAAGCACA GCGTGGGATT GTCTACATCG ATGAAATCGA CAAGATTTCT CGTAAGTCAG ACAACCCGTC GATCACCCGC GATGTTTCAG GTGAAGGTGT ACAGCAGGCG TTGCTGAAGC TTATCGAAGG GACGATTGCT GCTGTTCCGC CGCAGGGTGG GCGCAAGCAT CCGCAACAGG AGTTCTTGCA GGTTGATACC TCTAAGATCC TCTTTATCTG CGGCGGTGCG TTTGCAGGAC TGGACAAAGT GATCGAGCAA CGTACCGATA CAGGTCGCGG CATCGGCTTT AATGCAACGG TTAAAGGATC GGCTGACAAA GCAACAGAAG GCGAGCTGTT AAGCAATGTT GAACCGGGTG ACTTGATTAA ATTCGGTTTG ATTCCTGAGT TTATCGGCCG TCTGCCAGTG GTTGCTACGC TGAGAGAGCT GAGCGAAGAA GCGTTGATTC AGATTCTGCG TGAGCCTAAA AATGCGTTGA CCAAACAGTA TCAGGCGTTG TTCAACCTGG AGGGCGTTGA ACTGGAATTC CGCGATGAAG CGTTGACGGC GATTGCCAAG AAAGCGATGG CGCGTAAAAC CGGTGCACGT GGCCTGCGTT CTATCGTTGA AGCCGCTCTG CTGGATACCA TGTATGACCT GCCATCGCTG GAAAGCGTGG ACAAAGTCGT CATTGACGAA TCTGTTATTG CGGGTCAATC CGAGCCATTG CTGATCTATG GCAAGCATGA AACCCAGCAA GCTTCTGGCG AATAA
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Protein sequence | MTDKRKDGSG KLLYCSFCGK SQHEVRKLIA GPSVYICDEC VDLCNDIIRE EIKEVAPHRE RSALPTPHEI RRHLDDYVIG QEQAKKVLAV AVYNHYKRLR NGDSSNGIEL GKSNILLIGP TGSGKTLLAE TLARFLDVPF TMADATTLTE AGYVGEDVEN IIQKLLQKCD YDVQKAQRGI VYIDEIDKIS RKSDNPSITR DVSGEGVQQA LLKLIEGTIA AVPPQGGRKH PQQEFLQVDT SKILFICGGA FAGLDKVIEQ RTDTGRGIGF NATVKGSADK ATEGELLSNV EPGDLIKFGL IPEFIGRLPV VATLRELSEE ALIQILREPK NALTKQYQAL FNLEGVELEF RDEALTAIAK KAMARKTGAR GLRSIVEAAL LDTMYDLPSL ESVDKVVIDE SVIAGQSEPL LIYGKHETQQ ASGE
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