Gene PC1_1028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_1028 
Symbol 
ID8131957 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand+ 
Start bp1199008 
End bp1199988 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content55% 
IMG OID644864311 
Productthiamine monophosphate kinase 
Protein accessionYP_003016613 
Protein GI253687423 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0611] Thiamine monophosphate kinase 
TIGRFAM ID[TIGR01379] thiamine-monophosphate kinase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTGAAG GTGAGTTTGA CCTTATTGCC CGCTATTTTA ATCGGGTCCG AAGTTCACGT 
CGCGATGTTG AGTTAGGCAT TGGTGATGAC TGTGCGTTAC TGACGGTGGC AGATAAGCAG 
ATGCTGGCGG TGAGTACCGA CACGCTGGTA TCTGGCGTTC ATTTCCTACC CGATATCGAT 
CCCGCCGATC TGGGTTACAA ATCTCTGGCG GTCAATTTAA GCGATCTGGC TGCAATGGGC 
GCCGATCCTG CCTGGCTTTC TCTGGCCATT ACCCTACCGA CAAGCAATGG CCAGTGGCTG 
TCCGCCTATA GCGACAGCTT GTTCGAGCTA CTTGATTATT ACGGTATGCA GTTGGTTGGC 
GGAGATACGA CGCGCGGTCC ACTGAGCCTG ACGCTGACTA TCCACGGCCT GGTGCCTGCT 
GGTCGGGCGT TGACGCGTCG CGGAGCCAGA GTTGGCGACT GGATTTATGT TACTGGTTCA 
TTAGGCGACA GCGCTGCAGG TCTGGCTATT CTACAGAATA CGCTGCACGT TGATGATGAA 
GAGGCTCGTC AGGGATTGAT CCAGCGCCAT CTCCGCCCTC AACCCCGAAT CCTGCAAGGT 
CAGGCGCTGC GCGATCTGGC CAATTCGGCT ATCGATCTTT CCGACGGCCT TATATCCGAT 
CTACAGCATA TACTTAAAGC GAGCGAGTGC GGTGCGCGGA TTAATCTGGA CGCGATCCCG 
CAATCAGACT GGCTGCGAGG CTGCGTTGAT GAAGAGCAGG CGTTGCGTTG GGCGCTATCT 
GGCGGTGAAG ACTATGAGTT GTGCTTTACC GTACCGGAGA TTAACCGTGG TGCACTGGAG 
CTGGCTTTGG GGCATCTCGG TGCTAGCTAC ACCTGTATCG GGCAAATCGG GCCTGCATCT 
GAAGGGGTAC GCTTTTTCAG GGATAATAAA GCGACCGAGC TGAACTGGAA GGGGTATGAC 
CATTTTAGCG AGCAAAACTG A
 
Protein sequence
MVEGEFDLIA RYFNRVRSSR RDVELGIGDD CALLTVADKQ MLAVSTDTLV SGVHFLPDID 
PADLGYKSLA VNLSDLAAMG ADPAWLSLAI TLPTSNGQWL SAYSDSLFEL LDYYGMQLVG 
GDTTRGPLSL TLTIHGLVPA GRALTRRGAR VGDWIYVTGS LGDSAAGLAI LQNTLHVDDE 
EARQGLIQRH LRPQPRILQG QALRDLANSA IDLSDGLISD LQHILKASEC GARINLDAIP 
QSDWLRGCVD EEQALRWALS GGEDYELCFT VPEINRGALE LALGHLGASY TCIGQIGPAS 
EGVRFFRDNK ATELNWKGYD HFSEQN