Gene PC1_1019 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_1019 
Symboltgt 
ID8131948 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp1190978 
End bp1192123 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content52% 
IMG OID644864302 
Productqueuine tRNA-ribosyltransferase 
Protein accessionYP_003016604 
Protein GI253687414 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0343] Queuine/archaeosine tRNA-ribosyltransferase 
TIGRFAM ID[TIGR00449] tRNA-guanine transglycosylases, various specificities
[TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAGTACG AATTACAAAC AACGGACGGC CGTGCGCGAC GCGGTAGATT AATTTTTGAA 
CGTGGCGTGG TGGAAACCCC GGCTTTTATG CCCGTGGGGA CTTACGGCAC GGTGAAAGGC
ATGACGCCGG AAGAAGTAAA AGATACCGGC GCGCAGATTC TGCTCGGCAA TACGTTCCAT
CTGTGGCTGC GTCCCGGTCA GGAAATCATG AAGCTGCACG GCGATCTGCA CGATTTCATG
CAGTGGCATG GCCCGATTCT GACGGACTCC GGTGGTTTTC AGGTGTTCAG CCTCGGCGAT
ATTCGCAAGA TTACTGAACA GGGCGTGCAT TTCCGTAACC CGATCAATGG GGATTCGATT
TTCCTTAGCC CGGAAAAATC AATGGAGATT CAGCACGATC TCGGTTCCGA CATTGTAATG
ATCTTTGATG AGTGTACGCC GTATCCTGCC GACTGGGATT ACGCCAAGCG CTCGATGGAG
ATGTCACTGC GCTGGGCAAA ACGCAGCCGC CAGCGTTTCG ATGAGCTGGA GAATAAAAAC
GCGCTGTTCG GCATTATTCA GGGAAGTGTT TACGAAGATT TACGTGATGT ATCCGTAAAA
GGGCTGGTAG ACATTGGCTT TGATGGGTAC GCTGTGGGCG GTTTAGCGGT GGGCGAACCG
AAAGAAGACA TGCACCGCAT TCTGGAGCAC GTTTGTCCGC AGATCCCAGA AGATAAACCG
CGCTATTTGA TGGGCGTTGG TAAGCCGGAA GACCTGGTCG AAGGCGTACG CCGCGGTGTC
GATATGTTTG ACTGCGTGAT GCCAACGCGC AATGCACGTA ATGGACACCT CTTCGTGACC
GATGGCGTGG TGAAAATCCG TAATGCTAAG TATAAAGATG ACGTGAGTCC GCTGGATGAA
CACTGTGATT GCTACACGTG TCGCAATTAT AGCCGCGCCT ACTTGCATCA TCTTGACCGT
TGCAACGAAA TACTCGGAGC ACGACTCAAT ACCATTCATA ACTTGCGTTA TTATCAGCGT
TTAATGGCGG GTTTACGTCA GGCCATTGAA GAGGGTAAAT TAGAGCACTT TGTGGTGGAT
TTCTACCAAC GGATAGGTAA ACCCATTCCG CCGCTGGCGG AAAAAGACGT TGCCGCAGGC
AACTGA
 
Protein sequence
MKYELQTTDG RARRGRLIFE RGVVETPAFM PVGTYGTVKG MTPEEVKDTG AQILLGNTFH 
LWLRPGQEIM KLHGDLHDFM QWHGPILTDS GGFQVFSLGD IRKITEQGVH FRNPINGDSI
FLSPEKSMEI QHDLGSDIVM IFDECTPYPA DWDYAKRSME MSLRWAKRSR QRFDELENKN
ALFGIIQGSV YEDLRDVSVK GLVDIGFDGY AVGGLAVGEP KEDMHRILEH VCPQIPEDKP
RYLMGVGKPE DLVEGVRRGV DMFDCVMPTR NARNGHLFVT DGVVKIRNAK YKDDVSPLDE
HCDCYTCRNY SRAYLHHLDR CNEILGARLN TIHNLRYYQR LMAGLRQAIE EGKLEHFVVD
FYQRIGKPIP PLAEKDVAAG N