Gene PC1_1015 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_1015 
Symbol 
ID8131944 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand- 
Start bp1188099 
End bp1188701 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content54% 
IMG OID644864298 
Productalkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 
Protein accessionYP_003016600 
Protein GI253687410 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0450] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCCTGG TAACTCGTCA AGCCCCAGAC TTCACCGCAG CTGCCGTTTT AGGCAGTGGC 
GAAATCGTCG AAAATTTCAA CCTGAAGAAG CACATCAACG GTAAAGCTGC CGTGATTTTC 
TTCTGGCCGA TGGACTTCAC CTTCGTTTGT CCGTCAGAAC TGATTGCTTT CGATCACCGC 
TATGCCGAGT TCAAGAAACG CGGCGTAGAA GTGGTTGGCG TTTCCTTCGA CTCCGAGTTC 
GTACACAACG CATGGCGTAA AACCCCTGTG GACAAAGGCG GCATCGGCGA AGTGCAATAC 
GCAATGGTTG CTGACATTAA GCGCGAAATC CAGAAGGCCT ACGGCATTGA GCACCCTGAA 
GCCGGTGTTG CACTGCGTGG TTCTTTCCTG ATCGACAAAA ACGGCGTGGT TCGCCACCAG 
GTGGTGAACG ATCTGCCACT GGGCCGTAAC ATCGATGAAA TGCTGCGTAC CGTTGACGCG 
CTGCAATTCC ACGAAGAGCA CGGCGAAGTG TGCCCAGCAC AGTGGGAAAA AGGCAAATCC 
GGTATGGGCG CGTCACCAGA CGGCGTAGCG AAGTACCTGT CTGAAAACGC AGACAAGCTG 
TAA
 
Protein sequence
MVLVTRQAPD FTAAAVLGSG EIVENFNLKK HINGKAAVIF FWPMDFTFVC PSELIAFDHR 
YAEFKKRGVE VVGVSFDSEF VHNAWRKTPV DKGGIGEVQY AMVADIKREI QKAYGIEHPE 
AGVALRGSFL IDKNGVVRHQ VVNDLPLGRN IDEMLRTVDA LQFHEEHGEV CPAQWEKGKS 
GMGASPDGVA KYLSENADKL