| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1012 |
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| Symbol | |
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| ID | 8131941 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 1183530 |
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| End bp | 1184849 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644864295 |
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| Product | branched-chain amino acid transport system II carrier protein |
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| Protein accession | YP_003016597 |
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| Protein GI | 253687407 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1114] Branched-chain amino acid permeases |
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| TIGRFAM ID | [TIGR00796] branched-chain amino acid uptake carrier |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTCATC GTTTAACGTC TAAAGATATT GTGGCACTAG GTTTTATGAC CTTTGCTTTA
TTCGTGGGGG CTGGAAATAT TATTTTCCCG CCTATGGTGG GATTACAGTC GGGAGAGCAC
GTTTGGACGG CGGCGATCGG CTTCCTGCTG ACCGCGGTTG GTCTACCGGT GTTGACCGTG
ATTGCTCTGG CTCGGGTTGG CGGTGGCGTA GATGCGCTCA GCTCGCCGAT TGGTAAAAAA
GCGGGCGTGG TTCTGGCCAC GGTGTGCTAT CTGGCCGTTG GGCCACTATT CGCTACGCCG
CGTACGGCAA CCGTGTCGTT TGAAGTCGGC CTGGCTCCTC TGGTCGGCAA CGGAGCGTCT
CCGCTGCTGA TTTATAGCCT GATTTACTTT GCCATTGTTA TCGCAATTTC TCTGTATCCG
GGCAAACTGC TGGATACAGT TGGTCATGTG CTCGCGCCGC TGAAGATCAT TGCGCTGGCG
GTATTGGGTA TTGCTGCGGT GCTGTGGCCT GCGGGTACGC CAATTCCCGC GACGGAAGCG
TATGAGCAAC TGCCGTTCTC CAATGGCTTC GTCAACGGCT ATCTGACGAT GGATACGCTG
GGCGCGATGG TCTTTGGTAT CGTGATCGTC AATGCGGCGC GCTCACGTGG GGTGTCAAGC
CCTATGCTGC TGACGCGTTA CACGATGTGG GCGGGTTTGA TTGCCGGTAT TGGCCTGACT
CTCGTCTATT TGAGCTTGTT CCAGCTTGGT TCCGTCAGCG GCGAACTGGT GCCACAGGCG
CAGAACGGTG CTGAAATTCT CCATGCCTAT GTACAACACT CGTTTGGCAA TATGGGGAGC
AGCTTCCTGG CGTTGTTAAT CTTTATCGCC TGTCTGGTGA CGGCGGTGGG GCTAACCTGT
GCCTGCGCTG AATTCTTTGC GCAATACCTG CCGTTGTCTT ACCGCACGCT GGTGTTTGTG
CTGGGCATCT TCTCAATGGT GGTGTCGAAC CTGGGTCTTA GCCATCTGAT CCAACTTTCT
ATTCCTGTAC TGACAGCGAT TTATCCGCCA TGTATCATTC TGGTTTTATT GAGCTTTACG
CTGCGCTGGT GGAATAGCGC TTCACGTATT GTGGCGCCCG TCATGCTCGT TAGTCTGTTA
TTTGGCATGA TTGATGGTAT AAAATCGTCG GCTTTCAAAT CGCTGTTGCC AGAGTGGAGC
CTCAACCTGC CGCTGAGTGA GCAAGGGTTG GCATGGTTGC CACCGTCACT GCTGATTTTG
CTGGTCGCGG TGATTTACGA CAGAGTGTGT GGTCGTCAGG AAGTTACGGT ACATCAATAA
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| Protein sequence | MSHRLTSKDI VALGFMTFAL FVGAGNIIFP PMVGLQSGEH VWTAAIGFLL TAVGLPVLTV
IALARVGGGV DALSSPIGKK AGVVLATVCY LAVGPLFATP RTATVSFEVG LAPLVGNGAS
PLLIYSLIYF AIVIAISLYP GKLLDTVGHV LAPLKIIALA VLGIAAVLWP AGTPIPATEA
YEQLPFSNGF VNGYLTMDTL GAMVFGIVIV NAARSRGVSS PMLLTRYTMW AGLIAGIGLT
LVYLSLFQLG SVSGELVPQA QNGAEILHAY VQHSFGNMGS SFLALLIFIA CLVTAVGLTC
ACAEFFAQYL PLSYRTLVFV LGIFSMVVSN LGLSHLIQLS IPVLTAIYPP CIILVLLSFT
LRWWNSASRI VAPVMLVSLL FGMIDGIKSS AFKSLLPEWS LNLPLSEQGL AWLPPSLLIL
LVAVIYDRVC GRQEVTVHQ
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