| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_1006 |
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| Symbol | |
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| ID | 8131935 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 1173525 |
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| End bp | 1177208 |
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| Gene Length | 3684 bp |
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| Protein Length | 1227 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644864289 |
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| Product | SMC domain protein |
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| Protein accession | YP_003016591 |
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| Protein GI | 253687401 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0419] ATPase involved in DNA repair |
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| TIGRFAM ID | [TIGR00618] exonuclease SbcC |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.817412 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATCC TCAGTCTGCG CTTAAAGAAC CTCAACGCGC TGAAAGGCGA ATGGAAGATC
GACTTCACGC AGGAGCCCTT TTCCAGCAAC GGCTTATTTG CGATTACCGG CCCCACCGGC
GCGGGAAAAA CCACGCTGCT GGATGCCATA TGTCTGGCGC TTTACCACGA AACACCGCGA
TTGGGTCAGC TTTCTGAAAA GCATAATGAC CTGATGACGC ACAACACCTC CGAATGTCTT
GCAGAAGTTG AATTCGAAGT GAAAGGCGTC GGATACCGCG CCTTCTGGAG CCAACGTCGG
GCTAGGAACT CACCGGATGG TAATTTACAG ACACCAAAGG CCGAACTCGC CCTCATTGAA
GGCGGTAGAA TTCTGTGTGA AAAAATCACC GATAAAAAAA ATAGAGTAGA ACAAATCACC
GGACTGGATT TTGGCCGTTT TACACGATCC ATGATGTTGT CGCAGGGGCA ATTTGCTGCG
TTTCTCAACG CACAACCCAA AGACAGAGCG GACCTACTGG AAGAGCTGAC CGGCACAGAT
ATTTACGGAC TGATCTCCGA ACGCGTCTAT GACAAGCACA GGCAGGCGCT CGAAGCACTG
AACATGCTAC AGACGCGTGC ATCCAGCATT CAGCTGTTGA CCGATGAGCA GCGTCAGCAG
GTGGAAGTAC AGCTTGCCGA ACGGATCCAG CAGGAACAAC AGGGCAACGT TGAGCGTGAG
CAAGCACTGA CTACGCTACG CTGGTTTGAG CAACTGACGC AGCAGCAAAC GTCGGTAACT
CATACGCAGG CGCAACACAC GAGCGCCGAA TCCGCCATTC AGCAGGCCAG GCCGCAGCTC
GATAAATTAG CCAATAGCGA ACCGGCAGAA AAACTGAGGC CGCTACATCA GGAAAAAGAG
CGCTATCGGC AGGCGTCCCT GACCCTCGCC CAGCAGATTG AACAACTCAA CGGCAAGCTG
GCCGCAGAAC AGCTGGCGTT AAGAACGTTA CATCAGCAAG AAGAAAAAGC GGAACAGGAC
GTTAGTGAGC ACAAGCAGAT ACGACAACAG CAAGAGCAAC TGATCAACGA GCAGGTTGTA
CCACTTGACC ATCGCATTGC TACTCTGGAA CAGCAAAAAA ACCAGCAGCA GAACGAACTG
GCAAAAACGC AGGCTCGCCT GCACGCCGAC GACGCTAAAC AAACACTGGT CGCAGCGGAA
CAACAGCAGG CTAAACGGCA GCTTGAACAG ATCCAGTCTT ACCGCCAGCA ACACGCACAT
CATCAGCAGT GGGGAGAGCT GTTGCCTCTG TGGCGCACCC AGTTTCGGCA GTTGCGCCAG
TTACAGGACG AGCACCAGAA GCTGAACCAG AAACAGGCAC AGCATACGGC AGAGTCGACG
GCACGGCAGC AAGAAGCCGA CAAGCTGGCG GCACAGCAGC GTGAACAACA AAAAGTCGTT
GATGCTGTAC GCCAGCAGTT CACGCAACAC GATGAAACGC GGCAACATCA GGACACGCAT
CAGCCACTTT CCACTCTGCA CCAGCGCTTT AATCAGCTCA TGGATCAGCA GGCGACATGT
CGACAACTCG CCACCGTCAG CGACCAATAC CAGCGCCTTC AGGTGCGCAA GCAGCAACAT
CTCGCCAAAC TCGCTGAGGC ACAAGGCCAT ATCGACCAGT CAGAAATATT GCAGAAACAG
CAGCAGTCTG AACATCAGCA ACGCAGCGAG CGTCTGGCCG ATTTGGAAAC GATATATCGG
CAGGAAGTGC ATATCGTTAA GCTGGAAGCC GAACGGCAAC GGCTACAGGC CGGAGAGGCG
TGCCCGCTGT GTGGCTCAAC CGAGCACCCC GCTATCGAGC GCTATCAGGC ACTACAACCG
TCTGAAACCC AACGGCGTCT GACGGCGTTA CAGCAGGATG TAAACCAGTT AACCATCGCG
CTGGCGAATA CCACTGCTGA ACTGAACGCA CGCTTACAGC AGCGGGAACA GCTGCAATCG
GAACTTGCTC AATGTGATAG CGAACATCAG GCTCTGCTGC AACACTGGCA AAGTGTCAGT
GAGCGCTTAC AAGTTACCTA CTCGCTGGAA CAGCAGGACG AGATAGCCGT CTGGCTTACA
CTGCGTGAAG CCGAAGAACA GGCCATTCGA CAGCAGATTG CCGCGCGCGA GCAGTCGCAA
AAACTGTGGC AGGAAAGTAA GGATTTACTG ACTGCCGCAG AAGCATTATT ACGGGATCTC
GAACAGAAAA TCGCGCTGAA TGCCCAGCAA CAAACTTCGC TAGACGTTAC GCAGGAAGAA
ACGACGCAGT CGCTGCAAAA CGCACACCAA CAGATCACGC AACAGACTCA GGACATCACG
CAAACGCTGG CAACGGTGGG GCTTCTTTTG CCAGACACTG ACACACAGGA TGGCTGGCTG
GCTCAGCGTG ACAGCGAATG GCAAAACTGG AAAGCCAAAG AGCAGGAGCA GTCTCGCTTA
ACCCCTCTGT TAGCCACGCT GGAAAGCGAT CTTCAACATC TGCGTCACAG CGTAAGCGAG
GCAACACAGC ACATCCAAAC GCAGCAACAG CAGTTGGCAC AGCACCTCGC GCAGCTCAAC
ACAAGCCAAC AAGAGCGAAA GGTGCTATTT GGGGACAAGC AAATCACCGA TGTGCGCGAA
CAGCTACAAC GAACCAGCCA GCAGCGTGAT GATGCACTCA GGCTCGCGCA ATCAGCCCGT
CAGCAAACCG AAACGGCGTT AAGCCGTCTG ACGGGAGAGC TGGCTAGCAC GCAGCAGCAA
TATGAACAGA GCACGTGCCA GCATGAGAGT GCAACAGAAC GCTTTACTCT GGCGTTGCAG
CAAAGCACTT TCGTTGATGA AACCGCCTTT CTCCATGCAC TGCTTGATGA GCAGGAACGT
CAAACGTTGC AGGAATTCAA GGAAACGCTG CATCAGCGCT TGCAGCAAGC GGCGACACTG
CGCCAGCAGG CTGAACAGGC GCTACTTGAA CATCAACAAA AACGGCCAGC ATCCCTGACG
GAAGACGCTA CGCAAGAGGC GATACAGCAG CAGTTGGCCG CGCTGGATGA CACGCTGAAA
ACTAACTTGC GGCAGCAGGG GGAATTCCAG CGTCAGTTAT CTGACGACAA ACAACAGCGC
CAGAACCAGC AGAATTTACT TAATGAGATT GCCCAAAGCC AGCAAAAGAA TGACGACTGG
GAGACGTTAA ACTCGCTGAT CGGCTCCAGT AAAGGGGATA AATTCCGCAA ATTTGCTCAG
GGGCTGACCT TGGATCATCT GGTCTATCTC GCCAATCTCC AGCTTTCACG CCTGCACGAT
CGCTATCAGC TCAAACGTAA GCCCGGTGGC GATCTGGAAC TTCTGGTGAT GGATACCTGG
CAGGCGGACG CCGAGCGCGA CACAAAAACG CTATCCGGCG GCGAAAGTTT TCTGGTCAGT
CTGTCATTGG CGCTGGCGCT GTCCGACCTG GTCAGCCATA AAGCCAGTAT CGACTCGCTG
TTTCTGGATG AAGGCTTTGG CACGCTGGAT GCCGAGACGC TGGATATCGC ACTGGATGCG
CTGGATAACC TGAACGCCTC GGGTAAAACC ATCGGCGTCA TTAGCCATGT TGAAGCCATG
AAAGAGCGGA TTCCGGTACA GATCAAAGTG CAGAAGGTTA ACGGGCTCGG CGTCAGCAGG
CTGGCGCCGC AGTACGCCGT TTAG
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| Protein sequence | MKILSLRLKN LNALKGEWKI DFTQEPFSSN GLFAITGPTG AGKTTLLDAI CLALYHETPR
LGQLSEKHND LMTHNTSECL AEVEFEVKGV GYRAFWSQRR ARNSPDGNLQ TPKAELALIE
GGRILCEKIT DKKNRVEQIT GLDFGRFTRS MMLSQGQFAA FLNAQPKDRA DLLEELTGTD
IYGLISERVY DKHRQALEAL NMLQTRASSI QLLTDEQRQQ VEVQLAERIQ QEQQGNVERE
QALTTLRWFE QLTQQQTSVT HTQAQHTSAE SAIQQARPQL DKLANSEPAE KLRPLHQEKE
RYRQASLTLA QQIEQLNGKL AAEQLALRTL HQQEEKAEQD VSEHKQIRQQ QEQLINEQVV
PLDHRIATLE QQKNQQQNEL AKTQARLHAD DAKQTLVAAE QQQAKRQLEQ IQSYRQQHAH
HQQWGELLPL WRTQFRQLRQ LQDEHQKLNQ KQAQHTAEST ARQQEADKLA AQQREQQKVV
DAVRQQFTQH DETRQHQDTH QPLSTLHQRF NQLMDQQATC RQLATVSDQY QRLQVRKQQH
LAKLAEAQGH IDQSEILQKQ QQSEHQQRSE RLADLETIYR QEVHIVKLEA ERQRLQAGEA
CPLCGSTEHP AIERYQALQP SETQRRLTAL QQDVNQLTIA LANTTAELNA RLQQREQLQS
ELAQCDSEHQ ALLQHWQSVS ERLQVTYSLE QQDEIAVWLT LREAEEQAIR QQIAAREQSQ
KLWQESKDLL TAAEALLRDL EQKIALNAQQ QTSLDVTQEE TTQSLQNAHQ QITQQTQDIT
QTLATVGLLL PDTDTQDGWL AQRDSEWQNW KAKEQEQSRL TPLLATLESD LQHLRHSVSE
ATQHIQTQQQ QLAQHLAQLN TSQQERKVLF GDKQITDVRE QLQRTSQQRD DALRLAQSAR
QQTETALSRL TGELASTQQQ YEQSTCQHES ATERFTLALQ QSTFVDETAF LHALLDEQER
QTLQEFKETL HQRLQQAATL RQQAEQALLE HQQKRPASLT EDATQEAIQQ QLAALDDTLK
TNLRQQGEFQ RQLSDDKQQR QNQQNLLNEI AQSQQKNDDW ETLNSLIGSS KGDKFRKFAQ
GLTLDHLVYL ANLQLSRLHD RYQLKRKPGG DLELLVMDTW QADAERDTKT LSGGESFLVS
LSLALALSDL VSHKASIDSL FLDEGFGTLD AETLDIALDA LDNLNASGKT IGVISHVEAM
KERIPVQIKV QKVNGLGVSR LAPQYAV
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