| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0996 |
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| Symbol | |
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| ID | 8131925 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 1162413 |
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| End bp | 1163453 |
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| Gene Length | 1041 bp |
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| Protein Length | 346 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644864279 |
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| Product | L-asparaginase, type II |
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| Protein accession | YP_003016581 |
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| Protein GI | 253687391 |
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| COG category | [E] Amino acid transport and metabolism
[J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0252] L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D |
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| TIGRFAM ID | [TIGR00520] L-asparaginases, type II |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.396669 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTAACG CATTATTCGT TGTTGTTTTT GTTTGTTTTT CGTCTCTGGC AAATGCGGCA
GAAAATCTAC CTAACATTGT CATTTTGGCA ACGGGCGGTA CGATTGCTGG TTCCGCAGCA
GCTAACACGC AAACCACGGG GTATAAAGCG GGTGCGTTGG GCGTAGAGAC GCTGATTCAA
GCGGTGCCAG AGCTGAAAAC GCTTGCCAAT ATCTCCGGTG AGCAGGTTGC CAGCATTGGT
AGTGAGAATA TGACCAGCGA TGTCTTGCTG AAGCTGAGCA AGCGTGTGAA CGAGCTGCTG
GCACGCAGCG ATGTTGATGG CGTGGTCATT ACGCACGGTA CGGATACGCT CGACGAATCG
CCTTACTTTC TGAACCTGAC GGTGAAGAGT GACAAACCTG TGGTCTTTGC CGCAGCGATG
CGTCCGGCAA CGGCAATCAG CGCCGACGGT CCAATGAACC TGTACGGTGC GGTCAAAGTG
GCAGCGGATA AAAACTCACG TGGTCGCGGT GTACTGGTTG TATTGAACGA CCGTATCGGT
TCTGCACGCT TCATCAGCAA AACCAACGCC TCTACGCTGG ATACCTTTAA AGCGCCGGAA
GAAGGCTATC TGGGCGTGAT TATCGGTGAC AAAGTTTACT ACCAGACCCG TCTGGACAAA
ATCCACACCA CACGTTCCGT ATTTGACGTG ACCAACGTCG ATAAACTGCC CGCCGTTGAC
ATTATTTATG GTTATCAGGA CGATCCAGAA TACATGTATG ACGCGGCCAT CAAACATGGC
GTAAAAGGCA TTGTGTATGC GGGGATGGGC GCAGGTAGCG TATCCAAACG CGGCGACGCA
GGCATCCGTA AAGCGGAAAG CAAAGGCGTT GTTGTCGTTC GTTCTAGCCG TACTGGCAGT
GGCATCGTAC CACCGGATGC AGGCCAGCCT GGTCTGGTTG CCGATTCTCT GAGCCCGGCT
AAATCACGCA TTCTGCTGAT GCTGGCGCTG ACGAAAACGA CGAATCCTGC GGTGATTCAG
GATTACTTCC ACACGTATTA A
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| Protein sequence | MFNALFVVVF VCFSSLANAA ENLPNIVILA TGGTIAGSAA ANTQTTGYKA GALGVETLIQ
AVPELKTLAN ISGEQVASIG SENMTSDVLL KLSKRVNELL ARSDVDGVVI THGTDTLDES
PYFLNLTVKS DKPVVFAAAM RPATAISADG PMNLYGAVKV AADKNSRGRG VLVVLNDRIG
SARFISKTNA STLDTFKAPE EGYLGVIIGD KVYYQTRLDK IHTTRSVFDV TNVDKLPAVD
IIYGYQDDPE YMYDAAIKHG VKGIVYAGMG AGSVSKRGDA GIRKAESKGV VVVRSSRTGS
GIVPPDAGQP GLVADSLSPA KSRILLMLAL TKTTNPAVIQ DYFHTY
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