Gene PC1_0977 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_0977 
Symbol 
ID8131906 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp1126781 
End bp1127866 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content57% 
IMG OID644864261 
Productmurein hydrolase B 
Protein accessionYP_003016563 
Protein GI253687373 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2951] Membrane-bound lytic murein transglycosylase B 
TIGRFAM ID[TIGR02282] lytic murein transglycosylase B 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTCATT TGGTTCGTTT TCTCCCTCTG CTCGTCTTGC TCTCGGCTTG TAGCAGTCAG 
CCTGCTCCCC CTCCCGCAGA AGCGCCTTCA GGTAATCCTT TTAAAGGCGG CTTCCTGCTT
GAACCTGCAC ACAACGTCCA TCCGTTAGGC GGCGATTTTG CGACCAACCC GGCTACCGCG
CGGTTTGTCG ATAAAATGGT GCTGGAACAC GGCTTTAATC GCCAGCAACT GCATGATGTG
TTGGTCCAGG CAAAGAGTCT GGACTGGGTA ATCCGCCTGA TGGATAAACA AGCCCCGACT
TCGCGTCCGC CTTCAGGGCC GAACGGTGCC TGGAACCGCT ACCGTAATCA GTTTATTACG
CCAGACAACG TGCAGAACGG CGTGGCGTTC TGGAATCAAT ATCAGGATGC GTTACAGCGC
GCCCAAAACA TTTACGGTGT TCCGCCTGAG ATCATCGTCG GCATTATTGG CGTTGAAACC
CGCTGGGGCA GAGTGATGGG GAAAACGCGC ATCATCGATG CATTGGCAAC GCTGGCGTTT
GATTATCCGC GACGTGCCGA TTACTTTGCG GGCGAGCTGG AAACGTTCCT GCTGATGGCG
CGTAAAGAAG GCAACGATCC GCTCAGCCTG CGCGGCTCTT ACGCGGGGGC GATGGGCTAC
GGGCAGTTTA TGCCGTCATC CTTCAAGAAT TACGCCGTGG ATTTCGACGG TAACGGGCAT
ACCAACCTGT GGGATCCGGT GGATGCGATT GGCAGTGTGG CGAATTACTT CAAAGCGCAC
GGGTGGGTGA AGGGTGCCCC TGTGGCGGTG CAGGCAAACG GTCAGGCGCC ACTGCTGGCG
AATGGTTTTA ATACCCGTTA CTCGCTCACT GAACTACAGG CCGCGGGATT AACGCCACAG
CATTCGCTGG CGGGATACAG TGAAGCCAGC CTGCTGCGTC TGGATATTGG TACGGGGTAC
CAATACTGGT ACGGCTTGCC GAACTTCTAC ACCATCACGC GCTACAACCA CAGCACACAC
TATGCGATGG CCGTATGGCA ACTGGGTGAG GCCGTAGGCC GCGCGCGCCA AGGACAGAGT
TACTAA
 
Protein sequence
MRHLVRFLPL LVLLSACSSQ PAPPPAEAPS GNPFKGGFLL EPAHNVHPLG GDFATNPATA 
RFVDKMVLEH GFNRQQLHDV LVQAKSLDWV IRLMDKQAPT SRPPSGPNGA WNRYRNQFIT
PDNVQNGVAF WNQYQDALQR AQNIYGVPPE IIVGIIGVET RWGRVMGKTR IIDALATLAF
DYPRRADYFA GELETFLLMA RKEGNDPLSL RGSYAGAMGY GQFMPSSFKN YAVDFDGNGH
TNLWDPVDAI GSVANYFKAH GWVKGAPVAV QANGQAPLLA NGFNTRYSLT ELQAAGLTPQ
HSLAGYSEAS LLRLDIGTGY QYWYGLPNFY TITRYNHSTH YAMAVWQLGE AVGRARQGQS
Y