Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_0977 |
Symbol | |
ID | 8131906 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 1126781 |
End bp | 1127866 |
Gene Length | 1086 bp |
Protein Length | 361 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 644864261 |
Product | murein hydrolase B |
Protein accession | YP_003016563 |
Protein GI | 253687373 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
TIGRFAM ID | [TIGR02282] lytic murein transglycosylase B |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTCATT TGGTTCGTTT TCTCCCTCTG CTCGTCTTGC TCTCGGCTTG TAGCAGTCAG CCTGCTCCCC CTCCCGCAGA AGCGCCTTCA GGTAATCCTT TTAAAGGCGG CTTCCTGCTT GAACCTGCAC ACAACGTCCA TCCGTTAGGC GGCGATTTTG CGACCAACCC GGCTACCGCG CGGTTTGTCG ATAAAATGGT GCTGGAACAC GGCTTTAATC GCCAGCAACT GCATGATGTG TTGGTCCAGG CAAAGAGTCT GGACTGGGTA ATCCGCCTGA TGGATAAACA AGCCCCGACT TCGCGTCCGC CTTCAGGGCC GAACGGTGCC TGGAACCGCT ACCGTAATCA GTTTATTACG CCAGACAACG TGCAGAACGG CGTGGCGTTC TGGAATCAAT ATCAGGATGC GTTACAGCGC GCCCAAAACA TTTACGGTGT TCCGCCTGAG ATCATCGTCG GCATTATTGG CGTTGAAACC CGCTGGGGCA GAGTGATGGG GAAAACGCGC ATCATCGATG CATTGGCAAC GCTGGCGTTT GATTATCCGC GACGTGCCGA TTACTTTGCG GGCGAGCTGG AAACGTTCCT GCTGATGGCG CGTAAAGAAG GCAACGATCC GCTCAGCCTG CGCGGCTCTT ACGCGGGGGC GATGGGCTAC GGGCAGTTTA TGCCGTCATC CTTCAAGAAT TACGCCGTGG ATTTCGACGG TAACGGGCAT ACCAACCTGT GGGATCCGGT GGATGCGATT GGCAGTGTGG CGAATTACTT CAAAGCGCAC GGGTGGGTGA AGGGTGCCCC TGTGGCGGTG CAGGCAAACG GTCAGGCGCC ACTGCTGGCG AATGGTTTTA ATACCCGTTA CTCGCTCACT GAACTACAGG CCGCGGGATT AACGCCACAG CATTCGCTGG CGGGATACAG TGAAGCCAGC CTGCTGCGTC TGGATATTGG TACGGGGTAC CAATACTGGT ACGGCTTGCC GAACTTCTAC ACCATCACGC GCTACAACCA CAGCACACAC TATGCGATGG CCGTATGGCA ACTGGGTGAG GCCGTAGGCC GCGCGCGCCA AGGACAGAGT TACTAA
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Protein sequence | MRHLVRFLPL LVLLSACSSQ PAPPPAEAPS GNPFKGGFLL EPAHNVHPLG GDFATNPATA RFVDKMVLEH GFNRQQLHDV LVQAKSLDWV IRLMDKQAPT SRPPSGPNGA WNRYRNQFIT PDNVQNGVAF WNQYQDALQR AQNIYGVPPE IIVGIIGVET RWGRVMGKTR IIDALATLAF DYPRRADYFA GELETFLLMA RKEGNDPLSL RGSYAGAMGY GQFMPSSFKN YAVDFDGNGH TNLWDPVDAI GSVANYFKAH GWVKGAPVAV QANGQAPLLA NGFNTRYSLT ELQAAGLTPQ HSLAGYSEAS LLRLDIGTGY QYWYGLPNFY TITRYNHSTH YAMAVWQLGE AVGRARQGQS Y
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