Gene PC1_0955 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_0955 
SymbolrnhB 
ID8131884 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand+ 
Start bp1104983 
End bp1105579 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content55% 
IMG OID644864239 
Productribonuclease HII 
Protein accessionYP_003016541 
Protein GI253687351 
COG category[L] Replication, recombination and repair 
COG ID[COG0164] Ribonuclease HII 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones3 
Plasmid unclonability p-value0.0144418 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGAAA TATTTATCTA TCCGCAGGCG ACCTGTATCG CTGGCGTTGA TGAAGTGGGG 
CGCGGTCCTC TGGTTGGTGC TGTCGTGACG GCGGCGGTGA TTCTTGATCC GACTAGGCCA 
ATTGTCGGGC TGGCAGATTC TAAACAGCTG AGTGAAAAAC GCCGGCTAGC ACTCTATGAT 
GAAATCAAAG AGAAGGCGCT GGCGTGGAGC CTTGGCCGGG CTGAGCCGGA AGAGATTGAT 
CAACTGAATA TCCTGCATGC TACCATGTTG GCAATGCAGC GAGCGGTGGC CGGATTGGCT 
GTTGTACCCG ATTTTGTTCT GATTGATGGT AACCGTTGCC CGGCATTGCC GATGCCTTCT 
CAGGCGGTTG TTAAAGGGGA TAGTCGCGTG GCAGAAATCA GCGCGGCCTC GATTATGGCG 
AAAGTGACTC GCGATCGTGA GATGGTCGAG TTGGATGAAC GCTTCCCCGC TTATGGTTTT 
GCCCAACACA AAGGCTACCC AACGGCTTTC CATCTTGAGA AACTGGCCGC GCTGGGTGCC 
ACTGAGTTTC ACCGTCGGAG CTTCGCGCCA GTCAAACGAG CATTAGGGCT GGCGTAA
 
Protein sequence
MSEIFIYPQA TCIAGVDEVG RGPLVGAVVT AAVILDPTRP IVGLADSKQL SEKRRLALYD 
EIKEKALAWS LGRAEPEEID QLNILHATML AMQRAVAGLA VVPDFVLIDG NRCPALPMPS 
QAVVKGDSRV AEISAASIMA KVTRDREMVE LDERFPAYGF AQHKGYPTAF HLEKLAALGA 
TEFHRRSFAP VKRALGLA