Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_0941 |
Symbol | rpsB |
ID | 8131870 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 1090393 |
End bp | 1091118 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 644864225 |
Product | 30S ribosomal protein S2 |
Protein accession | YP_003016527 |
Protein GI | 253687337 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0052] Ribosomal protein S2 |
TIGRFAM ID | [TIGR01011] ribosomal protein S2, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0031234 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAACTG TTTCCATGCG CGATATGCTC AAGGCTGGCG TACACTTTGG TCACCAGACC CGTTACTGGA ACCCGAAAAT GAAACCATTC ATCTTCGGTG CGCGTAACAA AGTTCACATC ATCAACCTTG AAAAAACTGT ACCAATGTTC AACGACGCTC TTGCTGAATT GAGCAAAATT GCTTCTCGCA AAGGCAAAAT TCTGTTCGTT GGTACTAAGC GCGCAGCAAG CGAAGCGGTA AAAGATGCAG CCAACAACTG CGATCAGTTC TTCGTGAACC ATCGTTGGTT GGGCGGTATG CTGACTAACT GGAAAACCGT TCGTCAGTCC ATCAAACGTT TGAAAGATCT GGAAACCCAA TCTCAAGACG GCACGTTCGA CAAGCTGACC AAAAAAGAGG CGCTGATGCG CACTCGTGAA CTGGACAAGC TGGAAAACAG CCTGGGCGGT ATCAAAGATA TGGGCGGTCT GCCAGACGCG CTGTTCGTTA TCGACGCCGA TCACGAGCAC ATCGCAATCA AAGAAGCTAA CAACCTGGGT ATTCCGGTAT TCGCAGTGGT TGATACCAAC TCCGATCCAG ATGGCGTTGA CTACATCATC CCTGGTAACG ATGACGCAAT CCGTGCAGTT AGCCTGTACC TGAGCGCTGT TGCTACTGCT GTCCGCGAAG GCCGTTCTCA GGATCTGGCT GTGCAGGCAG AAGAAGGCTT AGTAGAAGCT GAATAA
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Protein sequence | MATVSMRDML KAGVHFGHQT RYWNPKMKPF IFGARNKVHI INLEKTVPMF NDALAELSKI ASRKGKILFV GTKRAASEAV KDAANNCDQF FVNHRWLGGM LTNWKTVRQS IKRLKDLETQ SQDGTFDKLT KKEALMRTRE LDKLENSLGG IKDMGGLPDA LFVIDADHEH IAIKEANNLG IPVFAVVDTN SDPDGVDYII PGNDDAIRAV SLYLSAVATA VREGRSQDLA VQAEEGLVEA E
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