| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0927 |
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| Symbol | |
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| ID | 8131856 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 1075695 |
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| End bp | 1076618 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644864211 |
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| Product | DNA-binding transcriptional activator GcvA |
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| Protein accession | YP_003016513 |
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| Protein GI | 253687323 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00141405 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCAAAAC GTCTCCCTCC GCTCAACGCA TTGCGCGTTT TTGATGCGGC GGCTCGCCAT
TTAAGCTTTA CCAAAGCGGC AGAAGAACTG TTTGTTACGC AGGCTGCCGT CAGCCACCAG
ATTAAGTCAC TGGAAGATTT TCTGGGGCTT AAATTGTTCC GCCGTCGTAA TCGTTCCCTG
CTGCTGACGG AAGAGGGGCA AAGTTACTAT CTTGATATCA AAGAGATCTT CTCATCTTTG
AATGACGCAA CCCGTAAGCT GCAATCCCGC AGCGCCAAAG GTGCGTTGAC GGTTAGCCTG
CTGCCCAGTT TTGCCATTCA TTGGCTGGTA CCGCGTCTGT CGAGCTTTAA CTCCGACTAT
CCGGGGATTG ATGTTCGTAT TCAGGCGGTG GATCGTGATG AAGATCGTCT GGCAGATGAC
GTGGATGTCG CGATTTTCTA CGGCCGGGGG AACTGGCCGG GGCTACGGGT AGAAAAGCTG
TACGCTGAGT ATCTCCTGCC AGTTTGTTCA CCAGCATTGC TGACGGGGAG CCACCCGTTA
AAGACGCCTG ATGATTTGGT GGCGCATACG CTGCTGCACG ATGCGTCGCG CCGTGACTGG
CTGTCCTATA CGCGTCAGCT TGGGGTGCAA ATTAACGTAC AGCAGGGGCC GATTTTCAGC
CACAGTGCCA TGGTGTTGCA GGCGGCCATC CACGGGCAAG GTGTGGCGCT GGCGAATAAT
GTTATGGCGC AAACGGAAAT TGAAGCTGGG CGACTGGTGT GTCCGTTTAA CGATGTGCTG
GTCAGCCGGA ATGCTTTTTA TCTGGTATGT CATGACAGTC AGGCAGAACT GGGTAAAATA
GCCGCCTTTC GCCATTGGAT TCTGGCGCGG GCTGCCAGCG AGCAGGAGAA ATTTCGTTTT
CGCTATGACA ACGGCACGCG CTGA
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| Protein sequence | MSKRLPPLNA LRVFDAAARH LSFTKAAEEL FVTQAAVSHQ IKSLEDFLGL KLFRRRNRSL
LLTEEGQSYY LDIKEIFSSL NDATRKLQSR SAKGALTVSL LPSFAIHWLV PRLSSFNSDY
PGIDVRIQAV DRDEDRLADD VDVAIFYGRG NWPGLRVEKL YAEYLLPVCS PALLTGSHPL
KTPDDLVAHT LLHDASRRDW LSYTRQLGVQ INVQQGPIFS HSAMVLQAAI HGQGVALANN
VMAQTEIEAG RLVCPFNDVL VSRNAFYLVC HDSQAELGKI AAFRHWILAR AASEQEKFRF
RYDNGTR
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