Gene PC1_0904 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_0904 
Symbol 
ID8131830 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp1043714 
End bp1044247 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content52% 
IMG OID644864185 
Productdinucleoside polyphosphate hydrolase 
Protein accessionYP_003016490 
Protein GI253687300 
COG category[L] Replication, recombination and repair
[R] General function prediction only 
COG ID[COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000367518 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATCGATG ATGATGGCTA CCGCCCAAAC GTTGGTATTG TAATCTGTAA TCGGCAGGGG 
CAGGTGATGT GGGCCCGGCG CTATGGTCAG CACTCCTGGC AGTTTCCGCA GGGGGGAATT
AACCCCGGTG AAAGTGCTGA GCAGGCGATG TACCGCGAAC TGTTTGAAGA AGTCGGGTTA
AGAAAAAAGG ATGTGCGCGT ACTGGCATCT ACCCGTAACT GGTTACGCTA TAAATTACCA
AAGCGTTTGG TGCGTTGGGA TACAAAACCG GTCTGTATCG GCCAAAAGCA GAAATGGTTT
TTGCTACAGT TGATGTGTAA TGAGTCGGAT ATCAATATGC AGAGCAGCGG CACGCCGGAA
TTTGATGGCT GGCGCTGGGT GAGTTACTGG TATCCGGTAC GTCAGGTCGT CTCTTTTAAG
CGAGATGTGT ATCGTCGCGT GATGAAGGAA TTCATCAACC CGGTGATACT GCTTCAGGAG
AGTGTTGCGG CTCGGGTGGC GACCCCATCC GGTCCCCGGC GAAAAAGAGG GTAA
 
Protein sequence
MIDDDGYRPN VGIVICNRQG QVMWARRYGQ HSWQFPQGGI NPGESAEQAM YRELFEEVGL 
RKKDVRVLAS TRNWLRYKLP KRLVRWDTKP VCIGQKQKWF LLQLMCNESD INMQSSGTPE
FDGWRWVSYW YPVRQVVSFK RDVYRRVMKE FINPVILLQE SVAARVATPS GPRRKRG