Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_0901 |
Symbol | |
ID | 8131827 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 1041368 |
End bp | 1042084 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 644864182 |
Product | Integral membrane protein TerC |
Protein accession | YP_003016487 |
Protein GI | 253687297 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0861] Membrane protein TerC, possibly involved in tellurium resistance |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00975959 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTGATT GGATTGTTGA TCCGAACGCT TGGTTGGCAT TGGGAACGCT GACTATTCTG GAAATCGTTC TTGGGATCGA TAACATTATC TTCCTGTCTC TGGTTGTCGC CAAACTGCCT AAAGCCCAAC AAAACAAAGC GCGCCGCATC GGGCTGATGG GGGCGATGTT GATGCGTTTG GGACTGCTCG CGTCTATTGC CTGGGTCATG CGTTTGACTG ACCCACTGTT TACCGCGTTC AACAACGAAA TTTCCACGCG TGACCTGATT CTGTTCTTCG GGGGGCTCTT CCTGATCTGG AAGTCGAGCA AGGAAATTCA CGAAACCGTC GAAGGCGGTT CAGAAGACCA TACTTCCAAG GTGTATTCGT TCTTTGGCGC GATTGTGCAA ATCATGCTGC TGGACATTAT CTTCAGCCTG GACTCGGTGA TCACCGCCGT CGGTCTGTCT GACCATCTGT TTATTATGAT GGCTGCCGTC GTTATCGCCG TTGGCGTGAT GATGTTCTCC GCACGCCCTA TCGGTGAATT TGTCGAACGC CACCCCTCCG TCAAAATGCT GGCCTTGTCG TTCCTGATTC TGGTCGGGTT CACCCTGATT CTGGAAAGCT TCGACGTTCA CGTACCAAAA GGCTATATCT ACTTCGCGAT GTTCTTCTCG ATGTCCGTCG AGGCGCTGAA TCTGTTGCGC AGTAAAAAAG AGAAAACGGC ACCCTGA
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Protein sequence | MFDWIVDPNA WLALGTLTIL EIVLGIDNII FLSLVVAKLP KAQQNKARRI GLMGAMLMRL GLLASIAWVM RLTDPLFTAF NNEISTRDLI LFFGGLFLIW KSSKEIHETV EGGSEDHTSK VYSFFGAIVQ IMLLDIIFSL DSVITAVGLS DHLFIMMAAV VIAVGVMMFS ARPIGEFVER HPSVKMLALS FLILVGFTLI LESFDVHVPK GYIYFAMFFS MSVEALNLLR SKKEKTAP
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