Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_0882 |
Symbol | |
ID | 8131808 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 1025535 |
End bp | 1026641 |
Gene Length | 1107 bp |
Protein Length | 368 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 644864163 |
Product | adenine DNA glycosylase |
Protein accession | YP_003016468 |
Protein GI | 253687278 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1194] A/G-specific DNA glycosylase |
TIGRFAM ID | [TIGR01084] A/G-specific adenine glycosylase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGCAAG CGCAACAGTT CGCCCATCAG GTGCTGGACT GGTATCAACG CTATGGCCGC AAAACCCTGC CGTGGCAGCT TGAGAAAACT CCCTATAAAG TATGGCTATC CGAAGTGATG TTGCAACAAA CGCAGGTCAC CACGGTTATT CCCTATTTCC AACGCTTTAT GGAACGTTTT CCAAACGTGA GCGCGCTGGC GGCAGCACCG CTGGACGAAG TGCTCCACTT ATGGACCGGA CTGGGCTACT ACGCCCGTGC GCACAACCTA CACAAAGCGG CCCAGACCAT CGTGTCACGT CACGGCGGTG AATTCCCCAC TACGTTTGAT GAAGTCGCGG CATTGCCGGG CGTCGGACGT TCCACCGCTG GCGCCGTGCT GTCACTCTCT CTCGGCCAGC ATTACCCGAT TCTCGACGGC AACGTGAAGC GCGTGCTGGC ACGCTGTTAT GCCGTTGACG GCTGGCCGGG CAAGAAAGAG GTCGAAAAGA AGCTGTGGGC GCGGAGTGAA GAGGTCACGC CAGCCGAGGG GGTCAGCCAG TTTAATCAAG CGATGATGGA TCTCGGTGCA ATGGTCTGTA CCCGCAGCCG CCCCAAGTGC GAGCTGTGCC CGCTCAACAC CGGCTGCATG GCTTACGCCA ACCACAGCTG GGGGCAATAC CCCGGCAAGA AACCGAAGCA GACGCTGCCG GAGAAAACCG GCTGGTTCCT GTTGATGCAG CAAGGCTCTC AGGTCTGGCT GCAACAGCGC CCTGCCGTGG GCCTGTGGGG CGGGTTATTT TGCTTCCCGC AGTTCAGTGA ACGTCGGGAA TTGGAACTCT GGATGCAACA ACGTGGTCTG AATCCTGATG GATTGCAACA GCTTGTCGCG TTCCGCCATA CATTTAGCCA TTTTCATCTG GATATCGTTC CGCTCTGGCT GGACGTATCG CAGAGCGATC GCTCACAAAA CAGGTCCTGC ATGGATGACG ATGCGGGTCT CTGGTATAAC TTAGCGCAGC CGCCGTCTGT CGGACTGGCC GCCCCGGTAG AACGCCTGCT GAGGGAGCTG GCTCACCCGC AGTCTACACA TTTGAATGCC TGCGCAATTG ATGAGGAAGA AGCATGA
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Protein sequence | MMQAQQFAHQ VLDWYQRYGR KTLPWQLEKT PYKVWLSEVM LQQTQVTTVI PYFQRFMERF PNVSALAAAP LDEVLHLWTG LGYYARAHNL HKAAQTIVSR HGGEFPTTFD EVAALPGVGR STAGAVLSLS LGQHYPILDG NVKRVLARCY AVDGWPGKKE VEKKLWARSE EVTPAEGVSQ FNQAMMDLGA MVCTRSRPKC ELCPLNTGCM AYANHSWGQY PGKKPKQTLP EKTGWFLLMQ QGSQVWLQQR PAVGLWGGLF CFPQFSERRE LELWMQQRGL NPDGLQQLVA FRHTFSHFHL DIVPLWLDVS QSDRSQNRSC MDDDAGLWYN LAQPPSVGLA APVERLLREL AHPQSTHLNA CAIDEEEA
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