Gene PC1_0882 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_0882 
Symbol 
ID8131808 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp1025535 
End bp1026641 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content58% 
IMG OID644864163 
Productadenine DNA glycosylase 
Protein accessionYP_003016468 
Protein GI253687278 
COG category[L] Replication, recombination and repair 
COG ID[COG1194] A/G-specific DNA glycosylase 
TIGRFAM ID[TIGR01084] A/G-specific adenine glycosylase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGCAAG CGCAACAGTT CGCCCATCAG GTGCTGGACT GGTATCAACG CTATGGCCGC 
AAAACCCTGC CGTGGCAGCT TGAGAAAACT CCCTATAAAG TATGGCTATC CGAAGTGATG
TTGCAACAAA CGCAGGTCAC CACGGTTATT CCCTATTTCC AACGCTTTAT GGAACGTTTT
CCAAACGTGA GCGCGCTGGC GGCAGCACCG CTGGACGAAG TGCTCCACTT ATGGACCGGA
CTGGGCTACT ACGCCCGTGC GCACAACCTA CACAAAGCGG CCCAGACCAT CGTGTCACGT
CACGGCGGTG AATTCCCCAC TACGTTTGAT GAAGTCGCGG CATTGCCGGG CGTCGGACGT
TCCACCGCTG GCGCCGTGCT GTCACTCTCT CTCGGCCAGC ATTACCCGAT TCTCGACGGC
AACGTGAAGC GCGTGCTGGC ACGCTGTTAT GCCGTTGACG GCTGGCCGGG CAAGAAAGAG
GTCGAAAAGA AGCTGTGGGC GCGGAGTGAA GAGGTCACGC CAGCCGAGGG GGTCAGCCAG
TTTAATCAAG CGATGATGGA TCTCGGTGCA ATGGTCTGTA CCCGCAGCCG CCCCAAGTGC
GAGCTGTGCC CGCTCAACAC CGGCTGCATG GCTTACGCCA ACCACAGCTG GGGGCAATAC
CCCGGCAAGA AACCGAAGCA GACGCTGCCG GAGAAAACCG GCTGGTTCCT GTTGATGCAG
CAAGGCTCTC AGGTCTGGCT GCAACAGCGC CCTGCCGTGG GCCTGTGGGG CGGGTTATTT
TGCTTCCCGC AGTTCAGTGA ACGTCGGGAA TTGGAACTCT GGATGCAACA ACGTGGTCTG
AATCCTGATG GATTGCAACA GCTTGTCGCG TTCCGCCATA CATTTAGCCA TTTTCATCTG
GATATCGTTC CGCTCTGGCT GGACGTATCG CAGAGCGATC GCTCACAAAA CAGGTCCTGC
ATGGATGACG ATGCGGGTCT CTGGTATAAC TTAGCGCAGC CGCCGTCTGT CGGACTGGCC
GCCCCGGTAG AACGCCTGCT GAGGGAGCTG GCTCACCCGC AGTCTACACA TTTGAATGCC
TGCGCAATTG ATGAGGAAGA AGCATGA
 
Protein sequence
MMQAQQFAHQ VLDWYQRYGR KTLPWQLEKT PYKVWLSEVM LQQTQVTTVI PYFQRFMERF 
PNVSALAAAP LDEVLHLWTG LGYYARAHNL HKAAQTIVSR HGGEFPTTFD EVAALPGVGR
STAGAVLSLS LGQHYPILDG NVKRVLARCY AVDGWPGKKE VEKKLWARSE EVTPAEGVSQ
FNQAMMDLGA MVCTRSRPKC ELCPLNTGCM AYANHSWGQY PGKKPKQTLP EKTGWFLLMQ
QGSQVWLQQR PAVGLWGGLF CFPQFSERRE LELWMQQRGL NPDGLQQLVA FRHTFSHFHL
DIVPLWLDVS QSDRSQNRSC MDDDAGLWYN LAQPPSVGLA APVERLLREL AHPQSTHLNA
CAIDEEEA