Gene PC1_0800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_0800 
Symbol 
ID8131725 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp933043 
End bp934008 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content51% 
IMG OID644864084 
ProductAlpha/beta hydrolase fold-3 domain protein 
Protein accessionYP_003016390 
Protein GI253687200 
COG category[I] Lipid transport and metabolism 
COG ID[COG0657] Esterase/lipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTATT CGACAACAAC AAAAATAGGG TTAGCAACCT TGGCAATGAT GAGCACGACC 
GCAATCAATG CGGCACAGAA TCAGCATGAA ATTACCGTAA AGCAGGAAAC GATATCCGTG
AAGTTAATCT CTGACGTCGT TTATTCTCAG GTATCGATGC GGGGCTATCC GAACGTTGCA
TTAAAAATGG ATATTCTTCA GCCCGACGCG AAGAAGGCGC TCCCCGTTGT GTTATTCATT
ACCGGCGGCG GCTTTATTAA CGCCAATAAA GATAATTACC TGCAACAGCG CCTGAGCATT
GCCGAAGCCG GTTATGTGGT TGCCAGCATG GAATACCGCG TCGCCCCCAC TGTTCTTTTC
CCCGCGCCGC TGGAAGATGT CAAATCCGCG CTTCGCTATC TGCGCGCCAA TGCGAAAAAA
TTCGGCATTG ATGGCCAGCA TGCTGCCGTT TTCGGTTCCT CGGCGGGAGG CTATCTGGCC
GCGTTTGCCG GAACGACAAA TGGTTCACAA GCCTACGATA AAGGCGACAA TCTTGACCAA
AGCAGTGATG TCCAGGCCGT CATCGATTTC TATGGTTTAT CCGATCTGAC GCTCGTCGGT
GAAGGTTTCC CTGACGATGT CGTTCAGAAG CATGCATCGC CTTCCGCGAC CGAAGCGATC
TGGGTCAACG GCACCGCCGT ATTTAATGAA GGCGGGCCGA TTACCCGCTA CCCGGATAAA
GCGGCAGCGG CCAACCCGAT TAACTTTATC AGCGCCACCA CACCGCCGTT CCTGATTATG
CACGGCACCA ACGATACTCT GGTTTCCCCA CGCCAGACCG AGCGGTTGCA TCAGGCTCTG
ACAGCAAAAA ATATTGAATC AACGTACTAC AGCGTTAAAG ACGCAGAGCA CGGCGGGCCG
CATTGGCTAC AGCCTGAAAT CATGAAAATT ACCGTGGGCT TTCTTGATAA ACACCTAAAA
CCTTAA
 
Protein sequence
MDYSTTTKIG LATLAMMSTT AINAAQNQHE ITVKQETISV KLISDVVYSQ VSMRGYPNVA 
LKMDILQPDA KKALPVVLFI TGGGFINANK DNYLQQRLSI AEAGYVVASM EYRVAPTVLF
PAPLEDVKSA LRYLRANAKK FGIDGQHAAV FGSSAGGYLA AFAGTTNGSQ AYDKGDNLDQ
SSDVQAVIDF YGLSDLTLVG EGFPDDVVQK HASPSATEAI WVNGTAVFNE GGPITRYPDK
AAAANPINFI SATTPPFLIM HGTNDTLVSP RQTERLHQAL TAKNIESTYY SVKDAEHGGP
HWLQPEIMKI TVGFLDKHLK P