Gene PC1_0799 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_0799 
Symbol 
ID8131724 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp931834 
End bp932532 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content51% 
IMG OID644864083 
Product4Fe-4S ferredoxin iron-sulfur binding domain protein 
Protein accessionYP_003016389 
Protein GI253687199 
COG category[C] Energy production and conversion 
COG ID[COG0437] Fe-S-cluster-containing hydrogenase components 1 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGAAT TATCTCGCCG TCGTTTTATT GCCTATATGG GAAGCGCGAT TGCCATTAGT 
GGGCCGGTCG GTTTCGCCAA AGCGCAAAAT GAATCAGAAA ACGCACAGGG TAAATTACCC
GTGAAATATG GCTTATTACA TAACGAAATG CGCTGTATTG GATGTAAAGC CTGTATCAAG
GCCTGCAAAG AAACGAATAA CGTTCCTGAT GGCGTCACCC GCCTGGATAT ATTGCAAACC
GTCGATATTC CCGCCGTTGA GAAAACGCGT GCGATTAAGC AATTTTTCCG CAAATCCTGT
CAGCACTGTG AGAACCCGCC CTGCGTTGCC GTCTGCCCAA CAGGCGCATC TTTCAAAGAT
GCGCTCACCG GTATTGTCGA CGTCAATGAC AAGCGCTGCG TAGGCTGCCG CTACTGCATT
GCCGCCTGTC CTTACCATGT GCGTTTCATC AACCCGGTCA CGAAGACGGC AGACAAATGT
AACTTTTGTC GGCAAACCAA TCTGGCCGCC GGGAAACAGC CCGCCTGCGT CGAAATCTGC
CCCACCAAAG CCTTGGTATT TGGCGATCTC AACGATCCTG AAAGCAACAT TGCCAAGATG
ATCGCCAGCA ACGCGACCTA CCGTTCCAAG GTTTATCTGG GCACCGAACC CCAGCTCTAC
CGTATGCCGG GGAAACGAGG AGAAATCGAC AATGCATAA
 
Protein sequence
MEELSRRRFI AYMGSAIAIS GPVGFAKAQN ESENAQGKLP VKYGLLHNEM RCIGCKACIK 
ACKETNNVPD GVTRLDILQT VDIPAVEKTR AIKQFFRKSC QHCENPPCVA VCPTGASFKD
ALTGIVDVND KRCVGCRYCI AACPYHVRFI NPVTKTADKC NFCRQTNLAA GKQPACVEIC
PTKALVFGDL NDPESNIAKM IASNATYRSK VYLGTEPQLY RMPGKRGEID NA