Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_0799 |
Symbol | |
ID | 8131724 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | - |
Start bp | 931834 |
End bp | 932532 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 644864083 |
Product | 4Fe-4S ferredoxin iron-sulfur binding domain protein |
Protein accession | YP_003016389 |
Protein GI | 253687199 |
COG category | [C] Energy production and conversion |
COG ID | [COG0437] Fe-S-cluster-containing hydrogenase components 1 |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAGAAT TATCTCGCCG TCGTTTTATT GCCTATATGG GAAGCGCGAT TGCCATTAGT GGGCCGGTCG GTTTCGCCAA AGCGCAAAAT GAATCAGAAA ACGCACAGGG TAAATTACCC GTGAAATATG GCTTATTACA TAACGAAATG CGCTGTATTG GATGTAAAGC CTGTATCAAG GCCTGCAAAG AAACGAATAA CGTTCCTGAT GGCGTCACCC GCCTGGATAT ATTGCAAACC GTCGATATTC CCGCCGTTGA GAAAACGCGT GCGATTAAGC AATTTTTCCG CAAATCCTGT CAGCACTGTG AGAACCCGCC CTGCGTTGCC GTCTGCCCAA CAGGCGCATC TTTCAAAGAT GCGCTCACCG GTATTGTCGA CGTCAATGAC AAGCGCTGCG TAGGCTGCCG CTACTGCATT GCCGCCTGTC CTTACCATGT GCGTTTCATC AACCCGGTCA CGAAGACGGC AGACAAATGT AACTTTTGTC GGCAAACCAA TCTGGCCGCC GGGAAACAGC CCGCCTGCGT CGAAATCTGC CCCACCAAAG CCTTGGTATT TGGCGATCTC AACGATCCTG AAAGCAACAT TGCCAAGATG ATCGCCAGCA ACGCGACCTA CCGTTCCAAG GTTTATCTGG GCACCGAACC CCAGCTCTAC CGTATGCCGG GGAAACGAGG AGAAATCGAC AATGCATAA
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Protein sequence | MEELSRRRFI AYMGSAIAIS GPVGFAKAQN ESENAQGKLP VKYGLLHNEM RCIGCKACIK ACKETNNVPD GVTRLDILQT VDIPAVEKTR AIKQFFRKSC QHCENPPCVA VCPTGASFKD ALTGIVDVND KRCVGCRYCI AACPYHVRFI NPVTKTADKC NFCRQTNLAA GKQPACVEIC PTKALVFGDL NDPESNIAKM IASNATYRSK VYLGTEPQLY RMPGKRGEID NA
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