Gene PC1_0793 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_0793 
Symbol 
ID8131718 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand+ 
Start bp925644 
End bp926774 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content60% 
IMG OID644864077 
Producttranscriptional regulator, AraC family 
Protein accessionYP_003016383 
Protein GI253687193 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG2169] Adenosine deaminase 
TIGRFAM ID[TIGR00589] O-6-methylguanine DNA methyltransferase 


Plasmid Coverage information

Num covering plasmid clones3 
Plasmid unclonability p-value0.0138198 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTAACG ATATGATGCT GGGTGATACG CCGTTTCAGG ATGCCGACTC GCGCTGGCAG 
GCGGTAGTGA CGCGCAATAG CGCGGCTGAC GGCTGCTTTA TCTATGCGGT GAAGACGACG 
GGGATTTACT GTGCGCCTTC CTGTGCGTCA CGCCAGCCCC GACGTGAAAA TGTGGTGTTT 
TTCGCGACTG CCGATGAGGC GCAGGCGGCG GGATTCCGTC CGTGCAAGCG GTGTCGTCAG 
GGAACGCTTT CGCGGCAGGA ACAGCAGGCG CAGCAAATTG CCCACGCGTG CCGGATAATT 
GAGCAGTCAG AGTATCCGCC GACGCTGGCA GTGCTGGCTC AGGCCGTGGG GATAAGCGCG 
TTCCATTTTC ATCGCGTGTT TAAAAATCTA ACCGGCCTGA CGCCCAAGCA GTATGCCAGC 
GGCCACCGTC ATCGCCAGCT ACGTGAACAG CTGGTGGAAA AGAGTGCCGT AACCGCAGCG 
ATTACGGCAG CGGGCTATGA CGCTAGCGGG CGTTTTTATG CTGAATCGGG CGCGCATTTA 
GGGATGACGC CAACGGCGTT TCAGAACAAA GGGAAAGGGA TGACGATCCG CTTTGCCATT 
GGTCGCTGTT CACTCGGTGA GGTGCTGGTG GCGGAAAGCG AGAAGGGGAT CTGCGCGATC 
CTGTTGGGAG ACGATCCTGA GTCTCTGCTC AACTCGCTTC AGGAGATGTT TACTCACGCG 
CAGCTGATCG GCGGCGATGC GGCGTTTGAG CAACGGGTGG CGCAGGTTGT CGGGTTTGTC 
GACGATCCGG CTATCGGGCT GACGCTGCCG CTGGATATTC GCGGTACGGC ATTCCAACAG 
CGTGTCTGGC AGGCGCTGCG CGCGATCCCC GCAGGAGAAA CGCTGAGCTA CCGTGAGGTT 
GCTGAACGCA TTGGTGCGCC AGCCGCCGTG CGTGCGGTCG CGGGTGCCTG TGCGGCCAAC 
CGACTGGCGG TTGCGATTCC CTGCCATCGC GTAGTCAGGC AGGATGGGGC GCTATCTGGC 
TATCGCTGGG GGGTTGTACG TAAACGTGCC CTGCTGGAGA AAGAGCAGTT GGATAAAGAG 
CGGGTGGAGA AAGAGCAGGG CACGCATCCG CAAGGGGAGC CGTTATCGTG A
 
Protein sequence
MRNDMMLGDT PFQDADSRWQ AVVTRNSAAD GCFIYAVKTT GIYCAPSCAS RQPRRENVVF 
FATADEAQAA GFRPCKRCRQ GTLSRQEQQA QQIAHACRII EQSEYPPTLA VLAQAVGISA 
FHFHRVFKNL TGLTPKQYAS GHRHRQLREQ LVEKSAVTAA ITAAGYDASG RFYAESGAHL 
GMTPTAFQNK GKGMTIRFAI GRCSLGEVLV AESEKGICAI LLGDDPESLL NSLQEMFTHA 
QLIGGDAAFE QRVAQVVGFV DDPAIGLTLP LDIRGTAFQQ RVWQALRAIP AGETLSYREV 
AERIGAPAAV RAVAGACAAN RLAVAIPCHR VVRQDGALSG YRWGVVRKRA LLEKEQLDKE 
RVEKEQGTHP QGEPLS