Gene PC1_0779 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_0779 
Symbol 
ID8131704 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp911466 
End bp912719 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content57% 
IMG OID644864063 
Productinner membrane protein YjeH 
Protein accessionYP_003016369 
Protein GI253687179 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0531] Amino acid transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00013478 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGTGAAG CAAAAGGATT AAAACAAGAG CTTGGCCTGA TTCAGGGCGT GGGGCTGCTT 
TCTACCTCTC TGCTAGGAAC CGGCGTGTTT GCGGTTCCTG CGCTGGTCGC ACAGCTGGCG
CAGCAGGATA GTCTCTGGGC GTGGCCGATC TTGATCCTGT TTGTTTTTCC TATTGCGATT
GGCTTTGCCG CACTGGGGCA ACATTTTCCT AATGCGGGCG GCGCAGCACA CTTTGTTAAT
CTGGCCTTTG GGCCGCGTAT GGCGCGAGTG ACTGGCTGGC TATTTCTTTC CGTTATTCCG
CTGGGGCTAC CCGCTGCTTT GCAGATTGCT GCCGGGTTCT GGCAGGCAGC ATTTGGCTGG
AGCGATCTGG GGTTGCTCTG CGTACAGTTG CTGACGCTGG GCGGTATCTG GCTGCTTGGC
CTGCGCAGTG CAGGATCCAG TGCCAACATT CAGATTATTA TCGCGATGTT GGTGGTGGGG
TTGGTTGTTG CTATCTGGTG GCAGGGCGAT ATTACGCCTG CACATATCCT CTGGCCGTCG
GTACAGGAAC TGTCATGGTC TAACACCTTT GGTGCGCTGG CAGTGATGTT CTGGTGCTTC
GTCGGCCTTG AAGCGTTTGC CCATATGGCG ACGGAATTTC GGGTACCGGA GCGGGATTTC
CCACGGGCTT TACTCATCGG TATGCTGGTT GCTGGCGCGG TTTACTGGGG ATGCACGGTG
GCCGTACTGC ATTTTAAGGC TTATGGCGAA GGGATTGCCG CAACGGCTTC ACTACCGGGT
ATCGTCGTGC AGCTGTTTGG CGAACATGCA CTGTGGATTG CCTGCTTTGT CGGGTATCTT
GCCTGCTTTG CCAGCGTGAA TATCTACACC CAGGGATTCG CCCGTCTCGT CTGGTCGCAG
GCACCGAAAG GCAGTGCGCT GGCGAAGCTG TCCGCGGGGC AGGCACCGGT AAATGCGCTG
TCGGTTGTGG TGACCTGCTG TCTGGTGTGC TGTCTGTTGA TTTACTGGCT CAGGCTACCG
CTGGATATGC TGATCGTGTA CGCGAACGGC ATCTTTGTGC TGATCTATCT GCTGTGTATG
CTGGCTGGGT GGCGCTTGCT GAAAGGGCGC GCCAGAGTCA TGGCGGCAAT CGGAGGCATG
CTCTGCTGTG CGCTGTTGCT GATGATTGGC TGGAAATCGC TGTATGCGTT AATCATGCTG
GCCGTACTAT GGCTGTTCCT GCCGCGCAAG CAGGTTGAAC TGGTTTCCCA CTGA
 
Protein sequence
MSEAKGLKQE LGLIQGVGLL STSLLGTGVF AVPALVAQLA QQDSLWAWPI LILFVFPIAI 
GFAALGQHFP NAGGAAHFVN LAFGPRMARV TGWLFLSVIP LGLPAALQIA AGFWQAAFGW
SDLGLLCVQL LTLGGIWLLG LRSAGSSANI QIIIAMLVVG LVVAIWWQGD ITPAHILWPS
VQELSWSNTF GALAVMFWCF VGLEAFAHMA TEFRVPERDF PRALLIGMLV AGAVYWGCTV
AVLHFKAYGE GIAATASLPG IVVQLFGEHA LWIACFVGYL ACFASVNIYT QGFARLVWSQ
APKGSALAKL SAGQAPVNAL SVVVTCCLVC CLLIYWLRLP LDMLIVYANG IFVLIYLLCM
LAGWRLLKGR ARVMAAIGGM LCCALLLMIG WKSLYALIML AVLWLFLPRK QVELVSH