Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_0771 |
Symbol | |
ID | 8131696 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 902914 |
End bp | 903594 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 644864055 |
Product | two component transcriptional regulator, winged helix family |
Protein accession | YP_003016361 |
Protein GI | 253687171 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000423816 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATATTT TACTGGTCGA TGACGACGTA GAGCTGGGCG ATATGCTCTG TGAGTATTTG AATGCGGAAG GGTTTTCGAC CTCTCGGGTG CTGACGGGCA AAGAAGGCGT TGATGGTGCG ATGTCGGGAG ATTACACCGC GATGATTCTG GATGTCATGC TGCCGGATAT GAGCGGGATT GACGTGCTGC GTCAGATCAG AAAAACCCAA CAGCTTCCCG TGATTATGCT GACGGCGAGA GGCGACAACA TCGACAGGGT TATCGGTCTG GAAATGGGCG CGGATGACTA TATGCCTAAA CCGTGCTACC CACGTGAACT GGTGGCAAGG CTGCGGGCGG TGCTACGTCG TTATGACGAT CAGCCGAGTA CTAAACGGGA TGAAAGCGTG GCGGCCAGTG GCGATCTGGT ATTGAACCCT GCAACGCGCA TCAGCGAATG GCGTGGGCAG CCGTTTGATC TGACGGCGTC TGAGTTTAAT TTGCTTGAGC TGCTGTTACG TTCCCCCGAG CGTGTGGTGT CAAAAGATGA ACTGTCCGAA AAATGTCTGG GGCGTCGTCG TGAAGCCTAT GACCGTAGCG TGGATGTGCA CATCAGCAAT ATTCGTCAGA AACTCAGCGC ATTGCCGGGC AGCACCATGA CGATTGAAAC TGTGCGCAGC GTGGGATACC GGATTCGCTG A
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Protein sequence | MNILLVDDDV ELGDMLCEYL NAEGFSTSRV LTGKEGVDGA MSGDYTAMIL DVMLPDMSGI DVLRQIRKTQ QLPVIMLTAR GDNIDRVIGL EMGADDYMPK PCYPRELVAR LRAVLRRYDD QPSTKRDESV AASGDLVLNP ATRISEWRGQ PFDLTASEFN LLELLLRSPE RVVSKDELSE KCLGRRREAY DRSVDVHISN IRQKLSALPG STMTIETVRS VGYRIR
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