Gene PC1_0771 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_0771 
Symbol 
ID8131696 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp902914 
End bp903594 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content54% 
IMG OID644864055 
Producttwo component transcriptional regulator, winged helix family 
Protein accessionYP_003016361 
Protein GI253687171 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000423816 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATATTT TACTGGTCGA TGACGACGTA GAGCTGGGCG ATATGCTCTG TGAGTATTTG 
AATGCGGAAG GGTTTTCGAC CTCTCGGGTG CTGACGGGCA AAGAAGGCGT TGATGGTGCG
ATGTCGGGAG ATTACACCGC GATGATTCTG GATGTCATGC TGCCGGATAT GAGCGGGATT
GACGTGCTGC GTCAGATCAG AAAAACCCAA CAGCTTCCCG TGATTATGCT GACGGCGAGA
GGCGACAACA TCGACAGGGT TATCGGTCTG GAAATGGGCG CGGATGACTA TATGCCTAAA
CCGTGCTACC CACGTGAACT GGTGGCAAGG CTGCGGGCGG TGCTACGTCG TTATGACGAT
CAGCCGAGTA CTAAACGGGA TGAAAGCGTG GCGGCCAGTG GCGATCTGGT ATTGAACCCT
GCAACGCGCA TCAGCGAATG GCGTGGGCAG CCGTTTGATC TGACGGCGTC TGAGTTTAAT
TTGCTTGAGC TGCTGTTACG TTCCCCCGAG CGTGTGGTGT CAAAAGATGA ACTGTCCGAA
AAATGTCTGG GGCGTCGTCG TGAAGCCTAT GACCGTAGCG TGGATGTGCA CATCAGCAAT
ATTCGTCAGA AACTCAGCGC ATTGCCGGGC AGCACCATGA CGATTGAAAC TGTGCGCAGC
GTGGGATACC GGATTCGCTG A
 
Protein sequence
MNILLVDDDV ELGDMLCEYL NAEGFSTSRV LTGKEGVDGA MSGDYTAMIL DVMLPDMSGI 
DVLRQIRKTQ QLPVIMLTAR GDNIDRVIGL EMGADDYMPK PCYPRELVAR LRAVLRRYDD
QPSTKRDESV AASGDLVLNP ATRISEWRGQ PFDLTASEFN LLELLLRSPE RVVSKDELSE
KCLGRRREAY DRSVDVHISN IRQKLSALPG STMTIETVRS VGYRIR