| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0754 |
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| Symbol | |
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| ID | 8131679 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 879098 |
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| End bp | 881377 |
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| Gene Length | 2280 bp |
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| Protein Length | 759 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644864038 |
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| Product | malic enzyme |
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| Protein accession | YP_003016344 |
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| Protein GI | 253687154 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0281] Malic enzyme |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0943824 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATGAAC AGCTAAAGCA AAGCGCCCTT GATTTCCACC AGTATCCGAT CCCCGGAAAA
ATTCAGGTTT CCCCGACGAA GCCGCTAGCG ACGCAGCGCG ATCTGGCGTT GGCGTATTCT
CCCGGTGTCG CCGCACCCTG TCTGGAAATT GCGGAAGATC CGCTGGCAGC CTACAAATAT
ACTGCGCGCG GCAATCTGGT CGCCGTGATC TCTAACGGAA CCGCCGTTCT CGGCCTCGGC
AATATCGGTG CACTGGCTGG TAAGCCAGTA ATGGAAGGTA AAGGCGTTCT GTTCAAAAAA
TTCTCCGGCA TTGATGTTTT CGATATCGAA GTCGACGAGC TGGATCCAGA CAAGCTGATC
GACGTGATCG CTGCGCTGGA GCCGACGTTC GGCGGTATCA ATCTGGAAGA CATCAAGGCA
CCGGAGTGCT TCTACATCGA GAAGAAACTA CGTGAGCGCA TGAAGATTCC CGTCTTCCAC
GACGATCAGC ACGGTACAGC GATCATCTGT ACTGCCGCCG TACTGAACGG CCTGCGCGTA
GTAGAAAAAA ATATTTCTGA CGTGCGTCTG GTGGTGTCCG GTGCGGGCGC GGCGTCTATC
GCCTGTCTGA ACCTGTTGGT GGCGTTGGGC CTTCAGAAGC ACAACATTGT CGTATGTGAT
TCGCGCGGCG TGATTTATCA CGGCCGTGAT GAAAACATGG AAGAAACTAA AGCGGCCTAT
GCAGTAGAAG ATAACGGCGC GCGCAAACTG GCAGACGTGA TCCCTAATGC GGATATCTTC
CTCGGCTGCT CCGGCCCTGG CGTACTGACG CAGGATATGG TGAAAACCAT GGCGCCGCGT
CCGCTGATCA TGGCATTGGC AAACCCTGAA CCGGAAATTC TGCCGCCGCT GGCGAAAGAA
GTGCGTCCGG ATGCGATTAT TTGTACCGGT CGTTCGGACT ATCCGAATCA GGTGAATAAC
GTCCTGTGCT TCCCGTTCAT CTTCCGCGGT GCGCTGGATG TGGGTGCGAC CACGATTAAC
GAAGAGATGA AGCTGGCTTG CGTGCACGCG ATTGCCGATC TGGCGCTGGC GGAGCAGAGT
GAAGTGGTGG CCTCTGCCTA TGGCGATCAG GATCTGTCAT TCGGGCCGGA TTATCTGATT
CCGAAACCGT TCGACCCGCG TTTGATCATC AAGATCGCAC CGGCAGTGGC GAAGGCGGCG
ATGGATTCCG GCGTGGCGAC GCGCCCTATC GAGGATTTCG ATGCCTACAT CGAAAAACTG
ACCCAGTTCG TCTACAAAAC TAACCTGTTC ATGAAACCGA TCTTCGCACA GGCGCGTCAG
CAGCCGAAGC GTGTGGTATT CGCGGAAGGG GAAGATGCGC GCGTGCTGCA TGCTACGCAG
GAGCTGGTAA CGCTGGGTCT GGCGTTCCCG ATTCTGATCG GCCGCCCGAG CGTGATTGAA
ATGCGTCTGC AAAAACTGGG GCTGCAACTG ACCATCGGTA AAGATTTCGA AGTGGTTAAC
AACGAATCGG ATCCGCGCTT CAAAGAATAC TGGAGCGAGT ATTTCCAACT GATGAAACGT
CGCGGTGTGT CGCAGGAAAA AGCACAACGC GCGGTGATCG GCAACCCAAC GCTGATTGGT
GCCATCATGG TTCACCGTGG CGAAGCGGAT GCGCTGATTT GCGGCACGAT TGGTACCTAT
GAAGAGCATT TCGATGTGGT CGAAAAAGTG TTCGGCTACC GCGAGGGCGT ACATGCGGCG
GGTGCGATGA ACGCGCTGAT GCTGCCGAGC GGCAATACCT TTATCGCTGA TACCTACGTC
AACGCAGATC CAACGCCGGA ACAGCTGGCG GAAATCACCC TGATGGCGGC AGAAAGCGTG
CGTCGTTTCG GTATCGAGCC GAAAGTCGCG CTGCTGTCTC ACTCCAGCTT CGGCACCTCG
GATTCTCCGA CGGCGCAGAA GATGCGGGCA ACGCTGGCGC TGGTCAACAA ACTGGCACCG
GAACTGGAGA TTGACGGCGA GATGCACGGC GACGCCGCGC TGGTGGAAGC GATCCGCCGC
GAGCAGATGC CGGACAGCCC GCTGAAAGGC TCGGCTAACA TCCTGATCAT GCCGAATATG
GAGTCTGCGC GTATCAGCTA TAACCTGCTG CGCGTGTCGT CTTCAGAAGG CGTGACGGTA
GGGCCGGTAC TGATGGGGAT CTCGAAGCCG GTACACATCC TGACGCCAAT TGCTTCAGTA
CGTCGGATCG TGAACATGGT GGCGCTGGCA GTGGTGGAAG CACAAACTCA ACCGCTGTAA
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| Protein sequence | MDEQLKQSAL DFHQYPIPGK IQVSPTKPLA TQRDLALAYS PGVAAPCLEI AEDPLAAYKY
TARGNLVAVI SNGTAVLGLG NIGALAGKPV MEGKGVLFKK FSGIDVFDIE VDELDPDKLI
DVIAALEPTF GGINLEDIKA PECFYIEKKL RERMKIPVFH DDQHGTAIIC TAAVLNGLRV
VEKNISDVRL VVSGAGAASI ACLNLLVALG LQKHNIVVCD SRGVIYHGRD ENMEETKAAY
AVEDNGARKL ADVIPNADIF LGCSGPGVLT QDMVKTMAPR PLIMALANPE PEILPPLAKE
VRPDAIICTG RSDYPNQVNN VLCFPFIFRG ALDVGATTIN EEMKLACVHA IADLALAEQS
EVVASAYGDQ DLSFGPDYLI PKPFDPRLII KIAPAVAKAA MDSGVATRPI EDFDAYIEKL
TQFVYKTNLF MKPIFAQARQ QPKRVVFAEG EDARVLHATQ ELVTLGLAFP ILIGRPSVIE
MRLQKLGLQL TIGKDFEVVN NESDPRFKEY WSEYFQLMKR RGVSQEKAQR AVIGNPTLIG
AIMVHRGEAD ALICGTIGTY EEHFDVVEKV FGYREGVHAA GAMNALMLPS GNTFIADTYV
NADPTPEQLA EITLMAAESV RRFGIEPKVA LLSHSSFGTS DSPTAQKMRA TLALVNKLAP
ELEIDGEMHG DAALVEAIRR EQMPDSPLKG SANILIMPNM ESARISYNLL RVSSSEGVTV
GPVLMGISKP VHILTPIASV RRIVNMVALA VVEAQTQPL
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