Gene PC1_0704 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_0704 
Symbol 
ID8131628 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand- 
Start bp830212 
End bp830838 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content54% 
IMG OID644863989 
ProductLysine exporter protein (LYSE/YGGA) 
Protein accessionYP_003016295 
Protein GI253687105 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCTTC ACCTCTGGCT GGCTTATACA GGCATCATCA TCGCCCTGAT TGCCATTCCG 
GGCCCATCCG CCTTAATCAG CATGTCGCAC GGTTTACGCT ACGGCGCTTC ACGCGCAACA 
GCAACCGTAC TCGGCGGCGT CAGTGCGGCA ATGATTTTGA TGTCCTGTTC AGCATTGGGG 
CTAGGGGCCA TCCTCGCTGC GTCAACCACC GCCTTCATGG TATTAAAAAT TATTGGTGCG 
GTTTATCTCA TTTGGTTGGG CATCGCGTCA TGGCGCTCTA AGGATATGAG CACTGCGGAA 
CAGGACGTGC AGGAAGCCTC GGCTCCTGGC TGGTTTCCGC TATTCCGTAA GGGCTTTCTG 
GTTGGGATCA GTAACCCGAA AGATCTGCTG TTTTTCGCCG CGCTTTTCCC AAATTTTATC 
GATACCAACG CCCCGCACGC CTTGCAGCTC ATCATTCTTG CGGTAACCTG GGCGGTCTTC 
GATTTCAGCA TCATGTTTAT CTATGCCTGC ACCGGTCGCC GTTTATCAGG CCTGTTTTCC 
AACCCACGCC GCATCAAGCT GTTTAACCGC TCGACGGGCG GGATCTTTAT TCTGGCAGGC 
ACCACGCTGG CAGCGTCAAC ACGTTAA
 
Protein sequence
MSLHLWLAYT GIIIALIAIP GPSALISMSH GLRYGASRAT ATVLGGVSAA MILMSCSALG 
LGAILAASTT AFMVLKIIGA VYLIWLGIAS WRSKDMSTAE QDVQEASAPG WFPLFRKGFL 
VGISNPKDLL FFAALFPNFI DTNAPHALQL IILAVTWAVF DFSIMFIYAC TGRRLSGLFS 
NPRRIKLFNR STGGIFILAG TTLAASTR