Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_0655 |
Symbol | |
ID | 8131579 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 758256 |
End bp | 759179 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 644863940 |
Product | lipid A biosynthesis palmitoleoyl acyltransferase |
Protein accession | YP_003016246 |
Protein GI | 253687056 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1560] Lauroyl/myristoyl acyltransferase |
TIGRFAM ID | [TIGR02207] lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.603489 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATTA AGCAAACTTT TACCAGGGCA TTACTCCACC CACGCTATTG GACGACTTGG TTCGGCCTTG GCGTGCTGTT TTTATTAGTT CAACTTCCTT ACCCGCTGCT GATGAAAATC GGGAGCAATG CGGGTCGCCT GTCCCGCGTT TTTCTTAAAC GTCGAGTGTC GATTGCCAGA CGTAACCTTG AATTATGCTT CCCTACGATC TCTGACGACG AAAAAGAAGC GATGATCGAC AGCAACTTTG CGTCGCTTGG AATGGCATTG GTCGAAACGG GCATGGCCTG GTTCTGGTCC GATCGTCGCG TGCGTCACTG GTTTGATGTT TCGGGACTGG AGCATTTACA TCAGGCTACA GCAAAAGGCC AGGGCGTGAT GGTGATTGGT ATTCACTTTA TGTCGCTGGA ACTGGGCGGC AGGGCGATGG GGCTATGTCG GCCGATGATG GCGATGTACC GTCCGCACAA TAATAAAGCG ATGGAAATGG TGCAAACCTG GGGACGTTCT CGTTCGAACA AGGCGATGAT CGACCGTAAA GATCTGCGTG GCATGGTGCA AGCACTGAAA CGCGGGGAAG CTGTTTGGTT CGCGCCCGAT CAGGATTACG GCCCTAAAGG CAGCGTGTTT GCCCCGTTCT TTGCAGTGAA AAATGCGGCG ACGACCAGTG GCACGTACAC GATCAGTCGT CTGGCAAAAC CGGCGATGAT GACGACGGTG CTGATTCGTA AGCCTGATGC CTCTGGCTAC CAGCTGGTGA TTCAGCCCGA ATTACAGGAT TACCCTTATC ATGATGAACA GGCGGCGGCG TGTTATATGA ATAAGGTGAT TGAGAAAGAA ATCATGCGTG CGCCTGAGCA GTATCTCTGG CTTCACCGTC GCTTTAAAAC GCGCCCGGCT GGGGAAGTGT CGCTCTACGC CTGA
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Protein sequence | MKIKQTFTRA LLHPRYWTTW FGLGVLFLLV QLPYPLLMKI GSNAGRLSRV FLKRRVSIAR RNLELCFPTI SDDEKEAMID SNFASLGMAL VETGMAWFWS DRRVRHWFDV SGLEHLHQAT AKGQGVMVIG IHFMSLELGG RAMGLCRPMM AMYRPHNNKA MEMVQTWGRS RSNKAMIDRK DLRGMVQALK RGEAVWFAPD QDYGPKGSVF APFFAVKNAA TTSGTYTISR LAKPAMMTTV LIRKPDASGY QLVIQPELQD YPYHDEQAAA CYMNKVIEKE IMRAPEQYLW LHRRFKTRPA GEVSLYA
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