Gene PC1_0646 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_0646 
Symbol 
ID8131569 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp748548 
End bp749264 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content52% 
IMG OID644863930 
Productthiol:disulfide interchange protein DsbC 
Protein accessionYP_003016237 
Protein GI253687047 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1651] Protein-disulfide isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.363751 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAG GGTTATTACT GCTTTCTTTA CTGGTAGCGA CGGCAACTAA CTTTGCTCAC 
GCCGATGATG CCGCGATCAA ACAGACGTTG ACGCGTCTGG ATATGCAGGG GGCGGAAATC
CTGCCTTCGC CGATGGCGGG TATGAAAACC GTCATTACCG ATAGTGGCGT GCTGTATATC
AGCGAAGACG GCAAGCATTT GCTGCAAGGC CCGCTTTATG ACGTGAGCGG CACCATGCCG
GTCAACACCA CCAATAAAAT CCTGATCGGC AAGATGGATG CACTACAGGA ACAGATGATT
GTTTATAAAG CCGCGCAGGA AAAACACGTT ATTACTGTTT TCACTGACAT CACCTGCGGC
TATTGCCACA AACTGCATGA ACAGATGAAA GATTACAACG CGCTGGGCAT TACCGTGCGT
TATCTGGCCT TCCCGCGTCA GGGCATGAAA TCGCCAGCAG CAAAAGATAT GCAGTCCATC
TGGTGCGTGG CCGATCGTAA TAAAGCGTTT GATAGCGCGA TGAAGGGCGA CGCGATCTCG
CCAGCAACGT GCAAAACCGA TATCGCCGCG CATTACCAAC TGGGCATCCA GTTTGGCGTG
CAGGGCACCC CTGCTATCGT GCTGCAAGAC GGTATGGTCG TGCCGGGATA CCAAGGGCCA
AAAGAAATGC TGGCGATGCT GGAAGCACAT AAAGCCTCGA AGAAAACCGG CGGTTAA
 
Protein sequence
MKKGLLLLSL LVATATNFAH ADDAAIKQTL TRLDMQGAEI LPSPMAGMKT VITDSGVLYI 
SEDGKHLLQG PLYDVSGTMP VNTTNKILIG KMDALQEQMI VYKAAQEKHV ITVFTDITCG
YCHKLHEQMK DYNALGITVR YLAFPRQGMK SPAAKDMQSI WCVADRNKAF DSAMKGDAIS
PATCKTDIAA HYQLGIQFGV QGTPAIVLQD GMVVPGYQGP KEMLAMLEAH KASKKTGG