Gene PC1_0631 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_0631 
Symbol 
ID8131554 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp733307 
End bp734614 
Gene Length1308 bp 
Protein Length435 aa 
Translation table11 
GC content55% 
IMG OID644863915 
Productextracellular solute-binding protein family 1 
Protein accessionYP_003016222 
Protein GI253687032 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1653] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTAAGC CTCGTATGAT GGCGCTGGCA ATCACCTTGC TGATGTCTGG CTCGGCGTTG 
GCAAAACAGA ATATTGATTT TATGTTCCCC GCACCGGTTG ATGGCAAGCT GACGATGGAA
ATGACGCGCA TCATCAAAGA GTACAACCAA TCGCAGGATC AGGTTGAAGT GCGCGGGATC
TTCACCGGCA ATTACGACAC GACCAAAGTG AAAGCGGAAG CTGCCGCCAA AGCGGGCGAT
CCGCCAGCGC TGGTGATCAT GTCGGCCAAC TTCACCGCCG ATCTGGTCAT CAAAGATGAA
ATCCTGCCGA TGGACGAACT GTTCAAATAC GGCAACGAAA AAGCCACGCC TTTCCTGACC
AAAAATTTCT GGCCTGCGCT GCACCAGAAT GCGCAGGTGA TGGGAGTGAC TTACGCGATC
CCATTCCATA ACTCGACGCC GATCCTCTAT TACAACGAAG ACATGCTGAA GAAGGCGGGC
TTTAACGAGC CGCCGAAAAA CTGGGATGAG GTGGTTGCGG TCGCGAAAAA ACTGACCGAT
CCGGCGAAGG GGCAGTGGGG CATCATGATT CCGTCCACGA ATGATGACTA CGGCGGCTGG
ATGCTGTCTG CGTTGACGCG TGCTAACGGC GGGGCGTATT ACAATGCTGA CTACCCAGGC
GAAGTCTATT ACAACACGGC ATCGACCAAA GGTGCGCTCC AGTTCTGGCG TGATTTGGTG
TATCGCGACA AGGTGATGCC GGCTGGCGTG CTGAATTCCA AACAGATCAG CGCCGCGTTT
TTCTCCGGTA AATTGGGTAT GACGATGCTG AGCACCGGTG CGCTGGGCTT TATGCGCGAA
AATACCAAAG ATTTTCAGTT GGGTGTGGCG ATGATGCCGG AAAAAGAGCG TCGCGGCGTG
ACCATCGGCG GGGCGAGTCT GGTGAGCTTC AAAGGGATTT CCGAAGAGCA GAAGAAAGCG
GCCTGGCAAT TCATGAACTA TCTGGTCAGC CCGGAAGTTA GCGGCAACTG GAGCCGTTTT
ACCGGCTATT TCGCGCCGCG TATGGCGGCC TATGATTTGC CGGAAATGAA GGATTATCTG
GCGAAAGATC CGCGTGCGGC GATTGCGCTG TCACAGCTGC AATATGCCCA TCCGTGGTAT
GCAACCTATG AGACGGTCGC GGTGCGTAAA GCGATGGAAA ATCAGCTGGC GGCGCTGCTA
AACGATCCGG CGAAAAAGGT TGATGACGCC GCTGCCGCTG CACAAAAAGA GGCGGACGGC
ATCATGAAGC CTTATGTGGA TAAAACCGCG CTGCGGGACG TGAAATAG
 
Protein sequence
MRKPRMMALA ITLLMSGSAL AKQNIDFMFP APVDGKLTME MTRIIKEYNQ SQDQVEVRGI 
FTGNYDTTKV KAEAAAKAGD PPALVIMSAN FTADLVIKDE ILPMDELFKY GNEKATPFLT
KNFWPALHQN AQVMGVTYAI PFHNSTPILY YNEDMLKKAG FNEPPKNWDE VVAVAKKLTD
PAKGQWGIMI PSTNDDYGGW MLSALTRANG GAYYNADYPG EVYYNTASTK GALQFWRDLV
YRDKVMPAGV LNSKQISAAF FSGKLGMTML STGALGFMRE NTKDFQLGVA MMPEKERRGV
TIGGASLVSF KGISEEQKKA AWQFMNYLVS PEVSGNWSRF TGYFAPRMAA YDLPEMKDYL
AKDPRAAIAL SQLQYAHPWY ATYETVAVRK AMENQLAALL NDPAKKVDDA AAAAQKEADG
IMKPYVDKTA LRDVK