Gene PC1_0597 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_0597 
Symbol 
ID8131517 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp696048 
End bp696347 
Gene Length300 bp 
Protein Length99 aa 
Translation table11 
GC content51% 
IMG OID644863878 
ProductGIY-YIG nuclease superfamily protein 
Protein accessionYP_003016188 
Protein GI253686998 
COG category[L] Replication, recombination and repair 
COG ID[COG2827] Predicted endonuclease containing a URI domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGAAC ACATCGAACA TCCCCAGTGG TATCTGTACA TACTGCGCAC AATCACCGGA 
GCGCTGTACA CGGGTATCAC GACGGATGTC AGCCGCCGCC TGAATCAACA TCAAACGGGA
AAAGGGGCGA AAGCGCTGCG GGGGAAAGGG GAGCTGACGC TGGTGTTTCA CTGTCTGGCG
GGCGATCGTT CGAACGCACT CAAACTGGAA TATCGTATTA AGCAGTTGAG CAAAAACCAA
AAAGAAAGGC TGGTACAAGA CCAGCCTCAG ACACTATGCA TTTCAGACAC AATGTATTGA
 
Protein sequence
MTEHIEHPQW YLYILRTITG ALYTGITTDV SRRLNQHQTG KGAKALRGKG ELTLVFHCLA 
GDRSNALKLE YRIKQLSKNQ KERLVQDQPQ TLCISDTMY