Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_0559 |
Symbol | rpmA |
ID | 8131477 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 646874 |
End bp | 647131 |
Gene Length | 258 bp |
Protein Length | 85 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644863838 |
Product | 50S ribosomal protein L27 |
Protein accession | YP_003016150 |
Protein GI | 253686960 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0211] Ribosomal protein L27 |
TIGRFAM ID | [TIGR00062] ribosomal protein L27 |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00191418 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCACACA AAAAAGCTGG CGGTTCAACC CGTAACGGTC GTGACTCTAA CGCACAACGT CTGGGCGTAA AACGTTTTGG CGGCGAAAGT GTACTGGCTG GTAACATCAT CGTTCGTCAA CGTGGTACCA AATTCCACGC AGGAACTAAC GTTGGCTGCG GGAAAGACCA CACTCTGTTT GCTTTGACTG ATGGTAAAGT TCAGTTTGAA GTTAAAGGCC CAAAAAACCG TAAATATATC AGCATCGTTG CTGAATAA
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Protein sequence | MAHKKAGGST RNGRDSNAQR LGVKRFGGES VLAGNIIVRQ RGTKFHAGTN VGCGKDHTLF ALTDGKVQFE VKGPKNRKYI SIVAE
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