| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0554 |
|---|
| Symbol | |
|---|
| ID | 8131472 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012917 |
|---|
| Strand | - |
|---|
| Start bp | 643770 |
|---|
| End bp | 644033 |
|---|
| Gene Length | 264 bp |
|---|
| Protein Length | 87 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 644863833 |
|---|
| Product | putative transcriptional regulator, Nlp |
|---|
| Protein accession | YP_003016145 |
|---|
| Protein GI | 253686955 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG3423] Predicted transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.0000290872 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTTTAA GGAAACAAGA CTGGCATCCC GCTGATATCA TTGCTGCACT GCGCAAGAAA
AACACGACGC TGGCGGCAGT ATCGCGAGCG GCCGGATTAA GCTCATCGAC GTTAGCCAAC
GCGCTCTCAC GCCCTTGGCC AAAGGGAGAA TGGCTTATTG CTGATGCGCT AAATATCCAC
CCATCAGAGA TTTGGCCGAG CCGGTACTAC GATCCGGAAA CCAATGAGCT TATCGACAGA
AAAAAACTCA TCCGCCCCGA TTAA
|
|---|
| Protein sequence | MILRKQDWHP ADIIAALRKK NTTLAAVSRA AGLSSSTLAN ALSRPWPKGE WLIADALNIH
PSEIWPSRYY DPETNELIDR KKLIRPD
|
|---|
| |