Gene PC1_0551 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_0551 
Symbol 
ID8131469 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand+ 
Start bp640710 
End bp641723 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content57% 
IMG OID644863830 
Productputative DNA-binding/iron metalloprotein/AP endonuclease 
Protein accessionYP_003016142 
Protein GI253686952 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0533] Metal-dependent proteases with possible chaperone activity 
TIGRFAM ID[TIGR00329] metallohydrolase, glycoprotease/Kae1 family 


Plasmid Coverage information

Num covering plasmid clones0 
Plasmid unclonability p-value0.000104624 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCGTAT TGGGTATCGA AACATCCTGT GATGAAACCG GCGTGGCCAT TTATGACACA 
GAAACCGGTT TGCTTGCCAA TCAGTTATAC AGCCAGGTTA AATTGCATGC CGATTACGGC 
GGCGTTGTGC CTGAGCTCGC CTCGCGCGAT CACGTGCGTA AAACGGTGCC GCTCATTCAG 
GCAGCGCTGC GTGAAGCCGG GTTGCAGGCT GGCGATATCG ATGGCGTAGC TTACACTGCG 
GGCCCCGGTT TGGTCGGCGC GTTACTGGTG GGTGCGACTG TCGGCCGCTC TCTGGCGTTT 
GCCTGGGATG TGCCGGCGAT TCCTGTGCAC CATATGGAAG GGCATTTGTT GGCACCGATG 
CTGGAAGATA ATCCACCGGC GTTTCCCTTC GTGGCGCTGC TGGTTTCTGG TGGGCATACG 
CAGCTCATCA GCGTGACGGG CATTGGTGAG TACCGCTTGC TGGGTGAGTC AATTGATGAC 
GCTGCGGGTG AAGCGTTCGA TAAAACGGCG AAGCTGTTGG GGCTGGATTA TCCCGGTGGG 
CCGATGCTAT CGAAAATGGC GCAGGCGGGA GATTCCCAGC GCTTTACGTT TCCGCGCCCA 
ATGACCGATC GCCCCGGTCT GGATTTCAGC TTCTCCGGGC TAAAAACGTT TGCTGCCAAT 
ACGATTCGTA GCAACGGTGA TGACGATCAA ACGCGTGCTG ACATTGCTCG TGCATTTGAA 
GATGCCGTGG TGGATACGCT GGCTATCAAG TGCCGTCGTG CGTTGGATGA AACAGGCTTT 
AAACGGTTGG TCATGGCGGG GGGCGTAAGT GCGAACCGGA CGCTGCGCCA GTGCTTAGGC 
GACGTGATGG CGAAACGTGG CGGCGAAGTG TTTTATGCGC GTCCTGAATT CTGCACGGAT 
AATGGTGCGA TGATTGCCTA TGCGGGCAGT GTACGTCTGG CGCATGGTGC CAGTCAGACG 
CTGGGTGTAT CCGTTCGACC ACGCTGGCCG TTGGCTGAAC TGCCAGCAGT ATGA
 
Protein sequence
MRVLGIETSC DETGVAIYDT ETGLLANQLY SQVKLHADYG GVVPELASRD HVRKTVPLIQ 
AALREAGLQA GDIDGVAYTA GPGLVGALLV GATVGRSLAF AWDVPAIPVH HMEGHLLAPM 
LEDNPPAFPF VALLVSGGHT QLISVTGIGE YRLLGESIDD AAGEAFDKTA KLLGLDYPGG 
PMLSKMAQAG DSQRFTFPRP MTDRPGLDFS FSGLKTFAAN TIRSNGDDDQ TRADIARAFE 
DAVVDTLAIK CRRALDETGF KRLVMAGGVS ANRTLRQCLG DVMAKRGGEV FYARPEFCTD 
NGAMIAYAGS VRLAHGASQT LGVSVRPRWP LAELPAV