| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0542 |
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| Symbol | |
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| ID | 8131459 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 626503 |
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| End bp | 628431 |
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| Gene Length | 1929 bp |
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| Protein Length | 642 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 644863820 |
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| Product | PTS system, beta-glucoside-specific IIABC subunit |
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| Protein accession | YP_003016133 |
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| Protein GI | 253686943 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1263] Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific |
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| TIGRFAM ID | [TIGR00826] PTS system, glucose-like IIB component
[TIGR00830] PTS system, glucose subfamily, IIA component
[TIGR01995] PTS system, beta-glucoside-specific IIABC component |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAGCA AAGTGCTCGC TGAAAATATT CTGAGGTTGG TCGGAGGGGA AACGAACGTT
TCGACTCTGG TGCATTGTGC AACACGCTTG CGCTTTAAGA TTGTTGATCA CGGTAAAGTG
GATGTGGCTG CGCTTGAGGC GTTGGAAGGC GTCATTACGG TCATCAATGC TTCAGGGCAA
TTGCAGGTGG TGATCGGGAA CCGGGTGCCG GAGGTGTATC GCGCTTTTGG TTCGATCTCC
AAGCTGCTTG AGGACGGCGA CGGGAAACGC CAGACCGCAG AAAGCGAGCA ATCGACCTCT
GCCATGGGAC GATTGATCGA TCTGGTTGCC GGGATCTTTA CCCCCTTGTT GGGCGCGATG
GCGGCAGCGG GGGTGCTGAA AGGGGCGCTG GCTATTGTCC TGGCGCTCGG GTGGCTGAAT
ACCAAAGAAA GTACCTATGT CATCCTGCAT GCGGCGTCCG ACAGCCTGTT CTATTTTTTG
CCGATGCTGT TGGCGATTAC CGCTGCGCGT AAATTCGAAA CCAACATTTT TGTGGCGGTG
TCGATTGCCG GTGCGCTGGT TTACCCGACG ATTCAGGGTT TATTTGATGC CGGTCAGCCT
GTGACGTTCT TCGGCCTGCC TGTGGTGATG ATGAAATACA CTGCCTCGGT GATCCCGATT
ATCTTCAGTG TGTGGCTGAT GTCGTATATC GAGCGTTTCC TGAATCGCCA TATTCACGAA
AGCGTGCGCA ATATCCTGAC GCCGTTCTTC CTGCTGCTAC TGATGGTGCC GCTAACGCTG
ATGACCATCG GGCCGATTGG GATTTCGGCC AGTAAGCTCA TTGCGTCGGT ATTCGTCAGT
ATCTATGAAT TCAACCCGAT TATTGCGGGC GCGCTGATGG CGGCGTCATG GCAGGTCTTA
GTGATATTTG GCGTTCACTG GGGCTTTGTG ACCGTGTTCA TCAACGATCT CTCCGTCATG
GGGCACAGCT ACCTTAAAGC CGCCTCCAGC CCGTCGGTCT TTGCCCAGTC TGGCGCACTG
CTGGGCGTGA TGGTGCGTAC CAAAGATAAA AAACTCAAAG CGTTGGCAGG CAGTACCTTT
ATCGCGTCGC TGTTTGGCAT CACGGAACCC GGTGTTTATG GGGTTACGCT GAAGCTGAAG
AAACCGTTTA TCTGCGCGGT GATCGCCGCT GCCATCGGGG GCGCTATCGT TGGCTATGCG
AAAAGCTCGG CGGTTTCTAT GGGGATGCCT GGGTTACTGA CGCTGCCGAT CTTCTACGGC
GAAGGCTTTG TCGGGTTCCT CATCGGCTGT GCTATCGCCT TCGCCGCGAG TTTTGTACTG
ACGGTTATTG TGGGATTTGA CGATCCGACG CCGCCGATTG AGAACACGTC AGCGCCCACA
CGTTCATCAT CAACTTCTGC GACACCCGCT GCGCCAGTAT CACGCCAGCC AGCCAATGCT
GTGCCACCTG CCCAACCGCT AAAAGACGCG CCAGCGACGG CGGAACAGCT GGGATCGCCG
GTAAAAGGCG AACTGATCTT GCTGGAAGAC GTGGACGATA AGGTGTTCTC TTCCGGCGTG
GTGGGGCAGG GCGTTGCTAT TCTGCCGGAA GAAGGGCGCA TCTATTCACC GGTGGACGGC
GTGATTGCCA GCACGTTCAG CAGCGGCCAT GCCGTCGGCA TTCTTGCGCA GAACGGTGCG
GAAATTCTGA TTCATGTCGG GATCAATACG GTGCAGTTGG AAGGCCAGCA TTATCAGATG
CACGTTGCAG AAGGTGACAA GGTGCAAAAA GGCCAGTTGC TGCTGGAGTT CGATCTGGAA
GCAATCAAGC AGGCAGGCTA CGACACGGTG ACACCGATGG TGGTGACGAA TGCGGATGAG
TACCACTTAT TCAGTCCGGG CTCCGCTCGT CAGTTGAGGG TCGGCGATAC GATTATTGCG
CTGGCGTAA
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| Protein sequence | MNSKVLAENI LRLVGGETNV STLVHCATRL RFKIVDHGKV DVAALEALEG VITVINASGQ
LQVVIGNRVP EVYRAFGSIS KLLEDGDGKR QTAESEQSTS AMGRLIDLVA GIFTPLLGAM
AAAGVLKGAL AIVLALGWLN TKESTYVILH AASDSLFYFL PMLLAITAAR KFETNIFVAV
SIAGALVYPT IQGLFDAGQP VTFFGLPVVM MKYTASVIPI IFSVWLMSYI ERFLNRHIHE
SVRNILTPFF LLLLMVPLTL MTIGPIGISA SKLIASVFVS IYEFNPIIAG ALMAASWQVL
VIFGVHWGFV TVFINDLSVM GHSYLKAASS PSVFAQSGAL LGVMVRTKDK KLKALAGSTF
IASLFGITEP GVYGVTLKLK KPFICAVIAA AIGGAIVGYA KSSAVSMGMP GLLTLPIFYG
EGFVGFLIGC AIAFAASFVL TVIVGFDDPT PPIENTSAPT RSSSTSATPA APVSRQPANA
VPPAQPLKDA PATAEQLGSP VKGELILLED VDDKVFSSGV VGQGVAILPE EGRIYSPVDG
VIASTFSSGH AVGILAQNGA EILIHVGINT VQLEGQHYQM HVAEGDKVQK GQLLLEFDLE
AIKQAGYDTV TPMVVTNADE YHLFSPGSAR QLRVGDTIIA LA
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