| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0539 |
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| Symbol | |
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| ID | 8131456 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 623590 |
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| End bp | 624078 |
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| Gene Length | 489 bp |
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| Protein Length | 162 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644863817 |
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| Product | periplasmic protein |
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| Protein accession | YP_003016130 |
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| Protein GI | 253686940 |
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| COG category | [N] Cell motility
[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3678] P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTAAAC TCACTGCAAT GCTGGTTGCT TCTTCTTTGG CATTGGGCGC GGCAGGTATC
GCGCATGCTA ATGAAGCATC GAAAGGTCCT GGCCCGGAAC ACAAGATGAT GATGAAAGAG
GGGCGGGAGC ATCGTGGCAT GATGGGGCCG GATGCGATGT TTAAGGAGCT GAATTTGACA
GAAGCGCAGA AGCAGCAAGT CAAAGACATC ATGAAAGAGT CCCGCGAGAA AATGCACAAA
GCGATGCAGG ATGACCGTCG TGAAATGCAT AGCCTGATCG CATCAGATAC CTTTGATACC
GCAAAAGCAC AGGCGCAGTT GGATAAAGCC GACGCGGAAC ACAAGGCCAG AATGCTTAAC
GGGCTGGAAA CCAAGAACAA AATTTACAAT GTTCTGACGC CAGAACAGAA GAAACAGTAC
AACGACAACT TTGAAAAACG ACTGACTCAA CCGCCAAGAC CGGATGGTAA GCCTGTCCCT
GCGGAATAA
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| Protein sequence | MRKLTAMLVA SSLALGAAGI AHANEASKGP GPEHKMMMKE GREHRGMMGP DAMFKELNLT
EAQKQQVKDI MKESREKMHK AMQDDRREMH SLIASDTFDT AKAQAQLDKA DAEHKARMLN
GLETKNKIYN VLTPEQKKQY NDNFEKRLTQ PPRPDGKPVP AE
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