Gene PC1_0485 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_0485 
Symbol 
ID8131401 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand+ 
Start bp569856 
End bp570992 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content57% 
IMG OID644863763 
Productphosphonate metabolism protein PhnM 
Protein accessionYP_003016077 
Protein GI253686887 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3454] Metal-dependent hydrolase involved in phosphonate metabolism 
TIGRFAM ID[TIGR02318] phosphonate metabolism protein PhnM 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCATTA ATAACGTCAA TATGGTACTC GCACAGGAAA TCATTCATGG CTCACTGGAA 
GTGCGCAACG GTGTGATTCA CCACATCAGC GATCGACCCA GCCGCCATCC CGGTGCGCTG 
GATGGTGAAC AGGCCTGGCT CCTGCCGGGG CTTGTCGAAC TTCATACGGA TAATCTCGAT 
AAGTGCTTCA CCCCGCGCCC CGGCGTTAAC TGGCCCTCTG AAGCGGCGAT GCGCAATCAC 
GATGCGTTGA TTATCTCCTG CGGAATCACC ACCGTTCTGG ATGCTGTCGC GGTAGGAGAT 
GTGCGCGATG GGGGGCATCG GCTTGAGAAT CTGCGACGCA TGACGGATGC CATACTGTAC 
AGCCAGCAGC ACGGCGCCAA TCGGGCGGAT CATCATTTGC ACCTGCGCTG TGAGCTGCCG 
CATCAGAATA CGTTTCCCCT CTTTGAGCAG TTGGCCGATA TTCCACTGGT CGCGCTCGCG 
TCATTGATGG ATCACTCTCC GGGGCAGCGG CAATTTTCCT CTCAGGAGAA ATATCATCAG 
TATTACAAAG GCAAATATCA CCTGAATGAC GAGCAAATGG CCGCGTTTGA GGAGGAGCAA 
CTGGCCGGTT CACGCCGCTG GTCGCAGCCT AATCGCGAGG CTATTGTTCG CCTCTGTCAC 
GATAGAGGCA TCACGCTAGC CAGCCATGAC GATGCGACGC CGGAACATAT CAGCGAAGCC 
CACCAGCATC GTGTGAGCAT TGCCGAATTT CCCACTACTA CGATCGCGGC GCAGCAGGCA 
CATGGCGTCG GAATGAATGT ACTGATGGGA GCGCCAAATG TCATCTGCGG TGGCTCGCAC 
TCGGGCAATG TGTCAGCACA TCATCTGGCG ACGCTGGGCG TACTTCACAT CTTGTCTTCG 
GACTATTACC CGGCCAGCCT GCTGGAGGCG GCGTTCATGA TTGCAGAGGA TGAACGCAAT 
GATTACGACT TGCCGCGCGC CATCGCGCTG GTCAGCAACA ATCCCGCTCA GGCGCTGCAA 
TTTGACGATC GCGGCTGCAT TGAAGAAGGA CGGCGAGCTG ACCTGCTGCT CGTCAAGCGG 
CAGGCGCCGC AAATGAAACT GATGCGCGTG TGGCGTCAGG GTGTCCGGGT ATTCTGA
 
Protein sequence
MIINNVNMVL AQEIIHGSLE VRNGVIHHIS DRPSRHPGAL DGEQAWLLPG LVELHTDNLD 
KCFTPRPGVN WPSEAAMRNH DALIISCGIT TVLDAVAVGD VRDGGHRLEN LRRMTDAILY 
SQQHGANRAD HHLHLRCELP HQNTFPLFEQ LADIPLVALA SLMDHSPGQR QFSSQEKYHQ 
YYKGKYHLND EQMAAFEEEQ LAGSRRWSQP NREAIVRLCH DRGITLASHD DATPEHISEA 
HQHRVSIAEF PTTTIAAQQA HGVGMNVLMG APNVICGGSH SGNVSAHHLA TLGVLHILSS 
DYYPASLLEA AFMIAEDERN DYDLPRAIAL VSNNPAQALQ FDDRGCIEEG RRADLLLVKR 
QAPQMKLMRV WRQGVRVF