Gene PC1_0464 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_0464 
Symbol 
ID8131380 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp529768 
End bp530643 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content56% 
IMG OID644863742 
ProductIsochorismatase 
Protein accessionYP_003016056 
Protein GI253686866 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1535] Isochorismate hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.889964 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAATCC CTTCTATTGC TTCTTATCCC CTGCCGCGCG CACAGGATTT CCCTGAAAAC 
AAGGTTTCCT GGGCGTTTGA GCCTGAGCGT GCGGTGCTGC TGATTCACGA CATGCAGGAC
TATTTCGTGA ATTTCTATGG TGCAGACAGC CCGCTGGCGC AGCAGTTGAT TGAGAACATT
GCGGCGCTGC GAACCTACTG CAAAGCACGG GGGATTCCAG TGGTGTATAC CGCGCAACCG
AATGCACAAA GCGCGGCCGA CCGGGCGCTG CTGAACGACA TGTGGGGAGC AGGATTGAAT
AATCACCCTG ACAAGCAGCG TGTCGTGAGT GCGTTGGCGC CGGATGAGCA CGACACCGTG
CTGGTGAAGT GGCGCTACAG CGCATTCCAC CGTTCGCCGC TGGAACCGAT GATGAAAGAA
ATGGGTAAAG ATCAGCTGAT TATCTGCGGC GTTTACGGGC ATATCGGCTG CATGATTACC
GCGACGGATG CTTTCATGCG CGACATCAAG CCGTTCATGG TCGGCGATGC GGTGGCGGAT
TTCTCACTTC AGGAACACCA GATGGCGCTG AAATATGTGG CGACGCGCGC CGGACGGGTG
GTTAGCACGG CAGAACTCAC AGGAGCAAAA ATGGCACAGA CACTGACGAA GCAAGGACTG
AGAGCACACC TGCTGACCTT GATCGACGAA GAAGAAGATC AGTTCGATGA AGATGAAAAC
CTGATCGACT ACGGTCTGGA CTCGGTGCGC ATGATGGCGC TGCTGACCGA ATGGCGCAAT
CAGGGCGTCA CGCTAAGTTT TGTCGATCTG GCGCGTAACC CCAGTCTGAA TGCGTGGTGG
GCACTGATCG AAAAACAGCA GGGAGCCGCA TCATGA
 
Protein sequence
MAIPSIASYP LPRAQDFPEN KVSWAFEPER AVLLIHDMQD YFVNFYGADS PLAQQLIENI 
AALRTYCKAR GIPVVYTAQP NAQSAADRAL LNDMWGAGLN NHPDKQRVVS ALAPDEHDTV
LVKWRYSAFH RSPLEPMMKE MGKDQLIICG VYGHIGCMIT ATDAFMRDIK PFMVGDAVAD
FSLQEHQMAL KYVATRAGRV VSTAELTGAK MAQTLTKQGL RAHLLTLIDE EEDQFDEDEN
LIDYGLDSVR MMALLTEWRN QGVTLSFVDL ARNPSLNAWW ALIEKQQGAA S