Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PC1_0464 |
Symbol | |
ID | 8131380 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
Kingdom | Bacteria |
Replicon accession | NC_012917 |
Strand | + |
Start bp | 529768 |
End bp | 530643 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 644863742 |
Product | Isochorismatase |
Protein accession | YP_003016056 |
Protein GI | 253686866 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1535] Isochorismate hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.889964 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAATCC CTTCTATTGC TTCTTATCCC CTGCCGCGCG CACAGGATTT CCCTGAAAAC AAGGTTTCCT GGGCGTTTGA GCCTGAGCGT GCGGTGCTGC TGATTCACGA CATGCAGGAC TATTTCGTGA ATTTCTATGG TGCAGACAGC CCGCTGGCGC AGCAGTTGAT TGAGAACATT GCGGCGCTGC GAACCTACTG CAAAGCACGG GGGATTCCAG TGGTGTATAC CGCGCAACCG AATGCACAAA GCGCGGCCGA CCGGGCGCTG CTGAACGACA TGTGGGGAGC AGGATTGAAT AATCACCCTG ACAAGCAGCG TGTCGTGAGT GCGTTGGCGC CGGATGAGCA CGACACCGTG CTGGTGAAGT GGCGCTACAG CGCATTCCAC CGTTCGCCGC TGGAACCGAT GATGAAAGAA ATGGGTAAAG ATCAGCTGAT TATCTGCGGC GTTTACGGGC ATATCGGCTG CATGATTACC GCGACGGATG CTTTCATGCG CGACATCAAG CCGTTCATGG TCGGCGATGC GGTGGCGGAT TTCTCACTTC AGGAACACCA GATGGCGCTG AAATATGTGG CGACGCGCGC CGGACGGGTG GTTAGCACGG CAGAACTCAC AGGAGCAAAA ATGGCACAGA CACTGACGAA GCAAGGACTG AGAGCACACC TGCTGACCTT GATCGACGAA GAAGAAGATC AGTTCGATGA AGATGAAAAC CTGATCGACT ACGGTCTGGA CTCGGTGCGC ATGATGGCGC TGCTGACCGA ATGGCGCAAT CAGGGCGTCA CGCTAAGTTT TGTCGATCTG GCGCGTAACC CCAGTCTGAA TGCGTGGTGG GCACTGATCG AAAAACAGCA GGGAGCCGCA TCATGA
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Protein sequence | MAIPSIASYP LPRAQDFPEN KVSWAFEPER AVLLIHDMQD YFVNFYGADS PLAQQLIENI AALRTYCKAR GIPVVYTAQP NAQSAADRAL LNDMWGAGLN NHPDKQRVVS ALAPDEHDTV LVKWRYSAFH RSPLEPMMKE MGKDQLIICG VYGHIGCMIT ATDAFMRDIK PFMVGDAVAD FSLQEHQMAL KYVATRAGRV VSTAELTGAK MAQTLTKQGL RAHLLTLIDE EEDQFDEDEN LIDYGLDSVR MMALLTEWRN QGVTLSFVDL ARNPSLNAWW ALIEKQQGAA S
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