| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0462 |
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| Symbol | |
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| ID | 8131378 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 526921 |
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| End bp | 528117 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644863740 |
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| Product | isochorismate synthase |
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| Protein accession | YP_003016054 |
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| Protein GI | 253686864 |
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| COG category | [H] Coenzyme transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1169] Isochorismate synthase |
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| TIGRFAM ID | [TIGR00543] isochorismate synthases |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGATACAC TGATTACAGA AGCTGAAACA TTTAGCGGGC TAACTTATTC GGAACAGACC
GCTTTTTTAT ATGCATCGGA ACACCGTAGC CTTTCTACTT CCGGCTTATT TGAACGTATT
TCGTCCCCTG TTTGTGCTTC AGATTCGCAC GATGACAGGC TTAGCTCTGC AATCGCGCAG
GCGTTCCAGC GAGCGCGTCA GGCGGGGCAG TCGCTGCCTA TTGTGGTTGG GGCGATTCCT
TTTGATACCA CGCAACCCTC TTGTCTCTAT ATCCCTGATA GCTATACCGT TACGACGAAA
TCTGAACTCG TCAGCCGGGC TCGTAAGCAC ACGGCGGCGG CACCTGCTGC GTTAACGTTA
AACAGCGTCC CGGATGAATG TCAGTTCAAG TCCATCGTGG CAGAGGCCGT TGAGCGCTTC
CGCCGCGGTG AACTGAGCAA AGCGGTACTG TCGCGCATTT TGGATATTGA GCTGGCGTGG
CCCGTTAAGG CGCAAACGAT CCTTAACAAC CTGATGGTGC AGAATGCGGG TGGCTATCAC
TTTTCGCTGC CGCTGCCGGA TGGTTCCATC TTACTGGGTG CCAGCCCGGA ACTGATGCTG
CGTAAGCAGG GCAACGTCAT TGTCTCCAAT CCACTGGCGG GATCGGCGCG GCGGATGAAC
GATGAACATC TGGATTACCT GAATAGCCAG CGCTTGCTGA ATTCCAGCAA AGACAAGCAC
GAGCATAAGC TGGTGGTGGA CGATATCCGC CAACGCCTGA TGCCGCTGTG CTCGTCGTTA
ACGATTCCAT CGGCTCCTTC GCTTATGAGC ACTGCCTCCA TGTGGCACTT GTCTACCGCC
ATCAGCGGCG AACTGGTTCA CCCAGAGATG ACGGCGCTTC AGGTAGCCTG TCAGCTACAT
CCCACCCCCG CGCTGTGCGG TTTCCCCACG CAGGAAGCGC GCCAACTGAT CGCTGAACTG
GAGCCGCACG ATCGTGGCGT ATTCAGCGGT ATTGTCGGCT GGTGTGACGC CAACGGCGAT
GGCGAATGGG CGATAGCGAT TCGCTGCGGG ACCATCAAAA ACAATAACGT CCGCCTGTTT
GCCGGTGCGG GCATTGTTGA GGCGTCAGTC CCCGAGGATG AATGGGCTGA AACCGCCGCC
AAATTAAACA CGATGCTGAA TGCGTTTGGC CTTAAATCAG GTGTGGACGG ACTATGA
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| Protein sequence | MDTLITEAET FSGLTYSEQT AFLYASEHRS LSTSGLFERI SSPVCASDSH DDRLSSAIAQ
AFQRARQAGQ SLPIVVGAIP FDTTQPSCLY IPDSYTVTTK SELVSRARKH TAAAPAALTL
NSVPDECQFK SIVAEAVERF RRGELSKAVL SRILDIELAW PVKAQTILNN LMVQNAGGYH
FSLPLPDGSI LLGASPELML RKQGNVIVSN PLAGSARRMN DEHLDYLNSQ RLLNSSKDKH
EHKLVVDDIR QRLMPLCSSL TIPSAPSLMS TASMWHLSTA ISGELVHPEM TALQVACQLH
PTPALCGFPT QEARQLIAEL EPHDRGVFSG IVGWCDANGD GEWAIAIRCG TIKNNNVRLF
AGAGIVEASV PEDEWAETAA KLNTMLNAFG LKSGVDGL
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