| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0460 |
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| Symbol | |
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| ID | 8131376 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 523283 |
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| End bp | 525229 |
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| Gene Length | 1947 bp |
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| Protein Length | 648 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644863738 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_003016052 |
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| Protein GI | 253686862 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGCTAA AATCGGAAAA TCGTTTTTCA CATCATCATT TCCCACACAG CAAGATGTAT
CGTGCCCTGC TGGTGACCGG ATTACTGGCA CTGCCTGCAC TTGCGCAGGC AGAAAACGCG
GCAGATGAAA AAATCGTCGT GACGGCAACG CAGACGAAAC ACACCACGCT AAGCGCTCCG
GCCAGCGTCT CTGTCATCAC CCGCGCCGAG TTGGAAAAGA TGTCGGTGAA TAACGTTTCC
GATGCGGTGA AAAAGCTGCC GGGGATTAAC ATCAACCCGT CGACTACCTA TGGCCGTAAC
GAAATTAAAA TCCGTGGTAT GCGGGCGGAC TACACGCTAC TGCTGGTAAA TGGTCGCCGT
ATCAACACCC AAGAATCACT TGCGACCGAT ATGGGGAATG ATTTCGATCT TAGCTCCATT
CCTATGTCGG CGATTGAACG TATCGAAGTG ATTCGTGGCC CGATGTCTTC TCTGTACGGT
GCCGATGCGC TGGGCGGTGT AGTCAACGTG ATTCTTCGCC AACCGGGGGA GAACGTTGCT
GGAGAAGTTG GCTATAACTT TCAGGCTCCA ACCGAAGGTT CCGGCGGCGA CCATAACCGT
CTGAATGGTT ACGTCAGCGG GCCATTGATA GAGAATACGC TGCTGGGCAG TTTGATTGTG
GACGGTGGCA AGCGCGATGC GTGGCGTACC GAGCAATCCA AGAATCGCAA CTCAGATGCG
CTGGAAAAAC GTGATAACTA CAGCGTGCTG GGTAACCTGA CATGGTTGAT CGATTCTCAA
CAGAGTCTGG ATTTTGATGC GACTTATACC AAAGATGACC GTTTCGTCGA TTGGAATAAC
TCTGGCGCAA CAGCTCACAA TACACAAAAA CTGGATCGCC TCGGTCTGGG ACTCACACAC
AACGGTAGCT GGGATAATTT CGATACGCGG CTGCGCTACT ACTACGAAAA CATCGATTTA
ATGGATAATT CTGAGCTAAA TAAAGGCATA GCTGATATCA CTCAGAATAA TCAGACGGTT
GATGGACAAA TCTCCGGTTA TCTGGGCGAT CACCTGCTGA CCGGCGGCGG CGAATACCGC
ATCACATCAC TGGAACACAG CATGAACCTG AAAGGCGGCA AAGTAGACGT CAATCAAAGT
GCTCTTTTCC TACAGGATGA ATTCAAGATT GCGGATTTAG CCCTCACGTT TGGTGGCCGC
GTCGACCACC ATGAGGTCTA TGGCACCGAG TTCAGCCCAC GCGCTTACGC TACCTATAGT
CTGACCGACA ACTGGGTGAT CAAAGGCGGC GTGAATAAGG CTTTTAAAGC GCCAACCCTC
GCTCAATTTA CCAAAGGCTA TACGAAAGCA GCATGCCGTG GTCAATGCTA CATCGTCGGT
AACCCTGACC TGAAGGCTGA AACCTCTATC AGCTATGAAC TGGGTACCGC CTATGAGGCC
GAGCATTTCG GCACTGGTAT CACCCTGTTT AACAATGATA TTAAAGATAT GATTCAAACC
AATTCGCTAA CACGAACCTA TGAAAACGTG AGTAAAGCGC GTGTGCAGGG GATTGAAACC
TCATTTTGGG TCGACCTGAC AGATGATCTG AACTGGACCA CCAACTGGAC CGTGGTTGAT
GCAGAAGACC GTGCGACCAG AATGCGCCTG AAGCAAACAC CGAAAAATAC GGTTAACACG
CAGTTGAACT GGCAGGCGCT GGATAATCTA TCTACCTACG TGTCCTATCA GTACACCAGC
AACCAATATT TGCGTGATAA AGAAACGTAT AGAACACGCG GTTTTAATAC CGTGGATATT
GGCGCGACCT ATACACCGGT TAAAAACGTG GATCTGAAAC TGGGTGTCAC TAACCTGACC
AACGAAAAAC GGGATTATGT TGCGACCGAT ATCGACTACT TCGTGTCTGG ACGTACGGTG
TACGGCGGCG TGAGCTATAA GTTCTGA
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| Protein sequence | MQLKSENRFS HHHFPHSKMY RALLVTGLLA LPALAQAENA ADEKIVVTAT QTKHTTLSAP
ASVSVITRAE LEKMSVNNVS DAVKKLPGIN INPSTTYGRN EIKIRGMRAD YTLLLVNGRR
INTQESLATD MGNDFDLSSI PMSAIERIEV IRGPMSSLYG ADALGGVVNV ILRQPGENVA
GEVGYNFQAP TEGSGGDHNR LNGYVSGPLI ENTLLGSLIV DGGKRDAWRT EQSKNRNSDA
LEKRDNYSVL GNLTWLIDSQ QSLDFDATYT KDDRFVDWNN SGATAHNTQK LDRLGLGLTH
NGSWDNFDTR LRYYYENIDL MDNSELNKGI ADITQNNQTV DGQISGYLGD HLLTGGGEYR
ITSLEHSMNL KGGKVDVNQS ALFLQDEFKI ADLALTFGGR VDHHEVYGTE FSPRAYATYS
LTDNWVIKGG VNKAFKAPTL AQFTKGYTKA ACRGQCYIVG NPDLKAETSI SYELGTAYEA
EHFGTGITLF NNDIKDMIQT NSLTRTYENV SKARVQGIET SFWVDLTDDL NWTTNWTVVD
AEDRATRMRL KQTPKNTVNT QLNWQALDNL STYVSYQYTS NQYLRDKETY RTRGFNTVDI
GATYTPVKNV DLKLGVTNLT NEKRDYVATD IDYFVSGRTV YGGVSYKF
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