| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_0458 |
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| Symbol | |
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| ID | 8131374 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | + |
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| Start bp | 521057 |
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| End bp | 522334 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644863736 |
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| Product | nucleoside transporter |
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| Protein accession | YP_003016050 |
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| Protein GI | 253686860 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG1972] Nucleoside permease |
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| TIGRFAM ID | [TIGR00804] nucleoside transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAACTCG TTATGAGTCT CATCGGCATG CTTGTTCTGA TTTTTTTCGC GGTTATTTTG
TCCAGTAATC GTAAAGCGAT CAGATTGCGC ACCGTAGTTG GTGCTTTCGT TATTCAGATT
GGTATCGGTG CGTTGGTGCT GTATGTGCCA GTAGGACGCA AAATTCTGGA GGGATTGACG
GGCGGTGTAG CAAACGTTAT CGCCTACGGA AACCAAGGGG TTTCATTCAT TTTTGGCGGT
CTGGTTTCCG ACAAAATGTT CGAAATCTTC GGCGGTGGCG GGTTTGTTTT CGCATTCCGT
GTATTACCGA TCATCGTCTT TTTCTCTTCC CTTGTAGCGG TACTGTACTA CATGGGGGTG
ATGCAGTGGG TCATCCGTTT ATTAGGCGGT GGGTTACAGA AACTGTTGGG AACGTCCCGT
ACTGAGTCGC TCTCTGCCAC GGCTAATATT TTTGTCGGCC AAACAGAAGC ACCGCTGGTG
GTTCGCCCGT ATATCGCCAA CATGACGCGT TCAGAGTTGT TTGCGGTGAT GTGCGGCGGA
TTAGCCTCCA TTGCGGGGTC TGTGATGGCA GGCTATGCCC AGATGGGCGT GCCGCTGGAC
TATCTGATTG CGGCTTCCTT CATGGCTGCG CCGGGTGGAT TGCTATTTGC CAAACTGATG
GTGCCGGAAA CGGAAAAAAC GCACGATCAT GACGAGATGG TTGGGTTTGT TGATGAAGAC
GATCGCCCGG CTAACGTCAT TGATGCAGCG GCAAGCGGTG CGGCGTCCGG TATGCAACTG
GCGCTGAATG TGGGCGCGAT GTTGCTGGCT TTTGTCGCTT TGATTGCTCT TCTTAATGGC
ATTCTGGGTG GTATCGGTGG CTGGTTTGAT TACCCGCAAC TGTCAATGGA ATTGATGCTG
GGGTGGATAT TCTCACCTGT CGCCTTCTTA ATCGGCGTAC CGTGGCATGA AGCAACGGTA
GCGGGTTCGT TTATTGGGCA AAAGCTGATC GTTAACGAGT TCGTCGCTTA CATGAATTTC
AGCGAGTACC TGAAAGCGGA TGATGTGGTT GCTGCTGCGG GCTTGCAGGT TCTGTCGGAT
CATACCAAAG CTGTGATTTC GTTCGCGCTG TGCGGCTTTG CTAACCTTTC GTCTATTGCT
ATCCTTATTG GAGGTTTGGG CAGTATGGCA CCGAGTCGGC GTCAGGATAT TGCCCGTTTG
GGTTTGAAGG CGGTCGCGGC AGGTACGCTT TCTAACCTGA TGAGCGCCTG CATCGCAGGG
TTCTTTTTGT CTCTGTAG
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| Protein sequence | MQLVMSLIGM LVLIFFAVIL SSNRKAIRLR TVVGAFVIQI GIGALVLYVP VGRKILEGLT
GGVANVIAYG NQGVSFIFGG LVSDKMFEIF GGGGFVFAFR VLPIIVFFSS LVAVLYYMGV
MQWVIRLLGG GLQKLLGTSR TESLSATANI FVGQTEAPLV VRPYIANMTR SELFAVMCGG
LASIAGSVMA GYAQMGVPLD YLIAASFMAA PGGLLFAKLM VPETEKTHDH DEMVGFVDED
DRPANVIDAA ASGAASGMQL ALNVGAMLLA FVALIALLNG ILGGIGGWFD YPQLSMELML
GWIFSPVAFL IGVPWHEATV AGSFIGQKLI VNEFVAYMNF SEYLKADDVV AAAGLQVLSD
HTKAVISFAL CGFANLSSIA ILIGGLGSMA PSRRQDIARL GLKAVAAGTL SNLMSACIAG
FFLSL
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